Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0167 |
Symbol | |
ID | 4078775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 184138 |
End bp | 184677 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638005461 |
Product | protein tyrosine phosphatase / dual specificity protein phosphatase |
Protein accession | YP_612162 |
Protein GI | 99080008 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2453] Predicted protein-tyrosine phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAAGTG CTACGAAATT GCAGCCGCAG CAGGCTGAAC CAACTTTGTC GCTACATGCG CTTTCGGTGG GCGATGGGAT CCTCGCCCTG AGCCGGGCGC CCGGTGCAGG GGGCGATTAT GCCGCCGATC TGCGCCTGAT CCACGAATGG CGCCCGTCTA TGGTGATCTC GATGACCACG CGCGTCGAGC ATGTTATCCT TGGCGTAGAG ACTCTGGGCA CGGACATTCA GGGGCTTGGC AGCCGCTGGT TTCATATGCC GGTTGAGGAT TACCAGACCC CGACAAAGGA TCTTGAGGAT CATTGGCATC AGGTCAGCGC GCTCGCGCGG CAGGCCTTGT CGGGTGGAGG GCGTGTCCTT GTGCATTGCC GTGGCGGCTG TGGACGATCC GGCATGGCAG TGCTCCGGCT GATGATCGAG AGCGGCGAGC CGCCGGATGC AGCTCTTGCA CGGCTCAGGG CCCTGAGGCC CTGTGCGGTG GAAACGGATG CGCAGATGGC CTGGGCCTAT GGCCGCCGTC GCCAAGCGCC GCCAGCATAG
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Protein sequence | MVSATKLQPQ QAEPTLSLHA LSVGDGILAL SRAPGAGGDY AADLRLIHEW RPSMVISMTT RVEHVILGVE TLGTDIQGLG SRWFHMPVED YQTPTKDLED HWHQVSALAR QALSGGGRVL VHCRGGCGRS GMAVLRLMIE SGEPPDAALA RLRALRPCAV ETDAQMAWAY GRRRQAPPA
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