| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2833 |
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| Symbol | |
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| ID | 8829245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013930 |
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| Strand | + |
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| Start bp | 188841 |
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| End bp | 190691 |
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| Gene Length | 1851 bp |
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| Protein Length | 616 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | |
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| Product | type II secretion system protein E |
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| Protein accession | YP_003494785 |
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| Protein GI | 290243115 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.587179 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.68865 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCATGG ACGCAGCCGA ACAAACCCAG GAAGGGGTCG AGGACGTGAA TGTTTTCGAC
GCCGAGGTAT CGATCGAGGA CGAGTGGCAG GAAGAGCCTG AGCCTAGCGG CGCGGGTCAG
ATGCGTGATC CGTACGCGGC TTTCGAAGAT CCTGAAATTC TGAAGATGTC CGACCTTCCG
GACTACGACT GGGTTCTGGA AGAAGGAGTG GGTGGAGTCA AGATTCCGGA CGGGATCGAG
AAGTTCGCTT GTATTATCGC CCGTGTTCAG GCGTGGCACG GCGATTTCAG TCGAGAGGAC
ATCCGTATTG CCAGTCTCCC GGATATGGTC GAGCAGGCGT CCGTTGACCT GGAAATCTGG
CTGGTGGTGA CCGGGCGCGT CAAGGATCGG AACGCGCTGA AGGTGGCTGA AATGGTGCGA
AGCCTTCGGA ATCGCTACCC ACGCGCCCGC CTGCATGCAA AGCCGAAAAT TGCCACGGCG
GCCATCATCG AGGCGATGTA TGAGCGAAAC AATGAGGTCG TCAATGGTGC GATCGAAGAT
GTTTCGGAAG AACAGCAGGA GTTCGACAAG CTCGGCCGAT ATGCCTTTGA TAACGGGGTG
TCGGACATCC ATATCGAGGT TACATCGGAG CAGGCCCAGA TCTTGATGCG CCAGCACGGC
CGGCTGCGGC ACTACAAGGA CCTGGCACCC GCCAAGGCCA CCGCCATTTG CTCGGCGGTC
TACAACACCA TGTCGGAAGC AGGTTCGACC CGTGACTCTT TCAATGAGCG CAAATTCCAA
AATGCGGTGA TTGACCGGCC GTACGATGAA GGGCGTGTCC GGTTTCGTTA CGCGTCCATG
CCGGTCGCAC CCAATGGGTT CAATGTGGTC CTGCGGTTGC TTCCGGTAGG TGTGGAAAGC
GCGCACAAGT CGTTCGAAGA CCTCGGTTAT GCCCCGGCGC ACACGCAGAG CATGCAGCGG
GCAATGGCGC GCTCATCGGG CATGGTGATC ATCGCGGGGA CCACCGGATC CGGTAAGTCC
ACGACCCTCA AGAATGCGAT GGAGGGCGTG GCAACAGCCA ATCCCGACCA GAAGATCCGA
ACCATCGAAG AGCCGGTCGA ATACTCAATC CGGAATACGT CGCAAACTCC GGTGGTGCGG
GACGATAAGG AGAAGGATGG GGCGAACTCC AGCAAACCGT TCGCTGATGC GATCAAGGCG
GCCATGCGGG CCGACCCGGA CCGAATGCTC GTCGGGGAGA TTCGAGACAA GATCACGGCC
GAGCTCGCGA TTCAGGCATC CCAGACGGGC CATGGCGTTG CCACGACCCT ACATGCGGAA
TCGTGGAGCG GGATCTTCGA TCGACTGGGA TTGCTGGGGA TACAGATGGG CGTGTTGGCG
CAGCCGGGCC TCATCGCAGG TTTGGCTTAC CAGAAACTGA TGCCGGTGCT GTGTGAGCAC
TGCAAGATTA GTTTCCATCA GTGGGTGGAT GAACAGGCAG ACATGGAGAA TCCAAAGGAC
TCAGGTTTTG TAGATCGAGT CCGTCGCGTC GTCCCCGACG CCGATCTGGT GATGGTCTAC
ATGACAGGGC CTGGGTGCCG TCAGTGTAAA GGGACAGGGA TAACCGGCCA GACGGTTTGC
GCGGAGGTCG TATTGCCAAC CAATGCCATG CTCGATGCGG TTCGTCATGG TGATGTCGTC
AAGCTGAGGC AGCTCTGGAG GGAACAACGA AACGACTCGG ACCCAGATGA CATGAGCGGG
CGGACTGCAT TCGAGCATGC CCTGCTGAAG ATGCGCCACG GGATCTGTGA TCCGAAAGAT
GTGGAAAGCA AGTTCATGCG GTTGGACGAA GTGTTCCACC TCGACGATTA A
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| Protein sequence | MSMDAAEQTQ EGVEDVNVFD AEVSIEDEWQ EEPEPSGAGQ MRDPYAAFED PEILKMSDLP
DYDWVLEEGV GGVKIPDGIE KFACIIARVQ AWHGDFSRED IRIASLPDMV EQASVDLEIW
LVVTGRVKDR NALKVAEMVR SLRNRYPRAR LHAKPKIATA AIIEAMYERN NEVVNGAIED
VSEEQQEFDK LGRYAFDNGV SDIHIEVTSE QAQILMRQHG RLRHYKDLAP AKATAICSAV
YNTMSEAGST RDSFNERKFQ NAVIDRPYDE GRVRFRYASM PVAPNGFNVV LRLLPVGVES
AHKSFEDLGY APAHTQSMQR AMARSSGMVI IAGTTGSGKS TTLKNAMEGV ATANPDQKIR
TIEEPVEYSI RNTSQTPVVR DDKEKDGANS SKPFADAIKA AMRADPDRML VGEIRDKITA
ELAIQASQTG HGVATTLHAE SWSGIFDRLG LLGIQMGVLA QPGLIAGLAY QKLMPVLCEH
CKISFHQWVD EQADMENPKD SGFVDRVRRV VPDADLVMVY MTGPGCRQCK GTGITGQTVC
AEVVLPTNAM LDAVRHGDVV KLRQLWREQR NDSDPDDMSG RTAFEHALLK MRHGICDPKD
VESKFMRLDE VFHLDD
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