Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_2699 |
Symbol | |
ID | 8829111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013930 |
Strand | - |
Start bp | 61135 |
End bp | 63435 |
Gene Length | 2301 bp |
Protein Length | 766 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | Rad3-related DNA helicase-like protein |
Protein accession | YP_003494652 |
Protein GI | 290242982 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.59552 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 0.502063 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGATTC GACTCAAGTA CAGCCCCGAA CGCCTCACCG ACATCCCCGC CACCGGGCAG AGCCGCTTCT TTCGGGAGCG CCTTCACGCC GCGGCGCATA CCGCCCGCCG CCGGCGGTTG CCGGCTGTGG GCCTTGACTC GATTTCCATC AATCTCGGGG CACGGGATCT CGCCGTGCTG TCCGGTCTGC GCCAGGGGGA TGAGCCGTGG TCCGAGGTAC TGAGCGAACT CCTGCACGGC CACCTGAATC AGCCGGGTGG GGAACCACGT TCGAAGCGAA CAGAGGCCGC GGATCGGAGG GCGGAAGGCC CGGACTGGAT GCGCCCGGAG CAGGGACGTT TCTATGCTCC GCTGGCCGAG GGGTTGGCGG CCAATGCGAT CTTGCTGGCG GAGGCAGCCA CCGGTACCGG CAAGGGCCGC GCGGTGGCAC AAGCGGTGGA GGATGCCCTG GCCGCCGGGC GCGAGCGGGT GGTGGTGTGC GGGCCCACGC TGGGCGTGCT GGCGGCACTG GCGCGGGAGT TCGGATCCTG CCCAGGGCTG AATCGACCCA TGCAGTTCTT TCTCGGCGCG GCACAATTCT TCCATGCCGG CCGCGCCCGC CAGCTCGCCT CCTTGATGCA GTCGGGTTCC GACCCGGAGA CCCAGGCCTC GGGTTCAGCC CTGCTGCAAT GGCTGGATGC AGGTGCGCCG GCGGGGCGAA CCGACTCGAC CGCAGCCTTC GCGTCGGTTG AAGGACAACC GGTCTCCCAC CTGACCGATG ATCTCGCCAC GCTGCTGCCG GATGGGTACG GGGTGGAGGA ATTGGAGCTG TCGGCGGAGG AGATCGGAGG CGACGCAGAA AGCGAAACCG ATCCGGGGAT TCGGGCGGCA ATGGCGGCAC GGGATCTGGA AGGGGATGCG CCGATCGTGT TCTGCACGCA CGCGATGTAC GCGCTCCACG CCCGAATGAT CGGCCTCGAG CGCTACCTGT TGCCGCCTCA CGAGGTCCTT GTGCTTGACG AGGCCCACCA GTTCGAGGAA AACGCCAACG CCGTCCTGTC CCCGACGGCC TCGCTGGATC AGCTCCCGCG CCTTTTGCGC TCACTGCCCG CGGCGTTGTT GCTGAAGACG GGTAAGCGGG ACCTCGAGGC GGTCGAAGAG GTCCTGAAGG ATTTGCACAA CCGGTTCCCC GAGCGGGGCG GGGAGATCCT GCTGTTTCCG GGCGATGATC GCTATGCGGC GGTTCAGGTT CAGGCGGGTC GGCTGCACCA GGCCGTTGAC GCCCTCATCG GGCGCGCGGA AAGGGCCCGC CAGCACACGG CCGATCCCGG CCTTCTCGCG CTGCTGAAGC GGACACGCTC GATTCTCCGG GCGTCCCAGC GCGAACGGGC CCTGCTGCAA CTGTCCTCAT CACCGGTGCG CGGCTACCTG TCGCTGGCGG TGGGTGGTCA GGGGCTGCGG CGCCTGTTCG AGCGCATGTG GTCGCAGGTC GACGCGGCGG TGCTGATGTC GGCCACGCTT TATGTCCCGA CACGGGATTC GCGGCGAGCC GACGTATCGG ATACGCAGGG CTGGTATTCG GCGCGTCATC TCACTCAGGT TTTGGCGCTC CCGCGCGAGC GTCTGCGTAC CCTCAAGCCC GTACGCCCGG ACTGGGTGCG GGGCAATGTG ATCGCCCATA TCGAGCGCAA CCCCGAGCGT CGACCGCCCA GCACGTCGGA AACTGACCCG GCAATCTACG CCGCACTGGT TCAGCAATGG CTGGACGATA CGGCACGGGA TCTTGCGCGG ATCACGGAGG GGGCGGAGCA GGGGACATTG GTCCTGCTGA CGGCCTACCG GGACATCGAG GGCCTGTCCG AACGTCTGGC CGATACGCTG GGCGAGCGTC TGATCGCCCA GGGCCCCGGC GCGCGGCTGT CCGCCCTTCG CGAGGCCTTC GTCGCGTCGA GCCGAAACGG GGAGCGTCCG GTGTGGCTCG CCACCGGTGC CGCATGGACC GGGATCAACC TGACGTCGGA GGGTTTGAGT CAGGTGTCGG ATCTGGTCAT CGCCCGTTTG CCGGTGGGGC TCAACCGCTC CATTTCCCAG GCGGCGCGCA ACCGGGGGCG GGCGAACTTC GAGTCCAAGG CGGCCGAGAC CTACTGGCAG ACCGCGCAGG GGATCGGGCG CATGGTCCGT TCAGAACAGG ATACGGATCG GCACTTGTGG GTACTGGACC CGCGCGCCGT CATCGAGCCG CTCTATACCC CCGTTCGCTT GCTTCTGGAG TCGTACCGGG TGTCGGACGG ACCCCGAGAT AGTGACTGCT CCCCGCCCTA A
|
Protein sequence | MQIRLKYSPE RLTDIPATGQ SRFFRERLHA AAHTARRRRL PAVGLDSISI NLGARDLAVL SGLRQGDEPW SEVLSELLHG HLNQPGGEPR SKRTEAADRR AEGPDWMRPE QGRFYAPLAE GLAANAILLA EAATGTGKGR AVAQAVEDAL AAGRERVVVC GPTLGVLAAL AREFGSCPGL NRPMQFFLGA AQFFHAGRAR QLASLMQSGS DPETQASGSA LLQWLDAGAP AGRTDSTAAF ASVEGQPVSH LTDDLATLLP DGYGVEELEL SAEEIGGDAE SETDPGIRAA MAARDLEGDA PIVFCTHAMY ALHARMIGLE RYLLPPHEVL VLDEAHQFEE NANAVLSPTA SLDQLPRLLR SLPAALLLKT GKRDLEAVEE VLKDLHNRFP ERGGEILLFP GDDRYAAVQV QAGRLHQAVD ALIGRAERAR QHTADPGLLA LLKRTRSILR ASQRERALLQ LSSSPVRGYL SLAVGGQGLR RLFERMWSQV DAAVLMSATL YVPTRDSRRA DVSDTQGWYS ARHLTQVLAL PRERLRTLKP VRPDWVRGNV IAHIERNPER RPPSTSETDP AIYAALVQQW LDDTARDLAR ITEGAEQGTL VLLTAYRDIE GLSERLADTL GERLIAQGPG ARLSALREAF VASSRNGERP VWLATGAAWT GINLTSEGLS QVSDLVIARL PVGLNRSISQ AARNRGRANF ESKAAETYWQ TAQGIGRMVR SEQDTDRHLW VLDPRAVIEP LYTPVRLLLE SYRVSDGPRD SDCSPP
|
| |