Gene TK90_2301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_2301 
Symbol 
ID8808081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp2420389 
End bp2420877 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content63% 
IMG OID 
ProductDomain of unknown function DUF1791 
Protein accessionYP_003461527 
Protein GI289209461 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.583301 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.0480111 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCCC TCTCGTTTCT CGCGCGCCCC GGCTGGTTCC TGGCCGGGGC GCTTTTCGTA 
CTGTCGCTGG GGGTCACCTG GGCCCTGTTC TCGTTCGAGC GAGACGGCGG CGAGACCGCT
GATGCCGACG ACACACTGCA GGTGGTCTAT CACATCAATG CCGATGATCC GGCTCTGCAC
CTCAATGCCC TGCGCAACCT GCAGAACCAT ATCGACGGCA GTGCGGTGGA TCGTCTGGAG
ATCAAGGTCG TGATGCACGG TGGCGGGGTC AGTCTGCTGC AGCACGCCAA GGACGACCCC
GACCTTCGCA GTACTGTGGA CACCCTGAAG ATGCAGGATG TGCGGTTCCT CGTCTGCGGC
AACACCCTGG ACAAGCGCGG GATCGAGCTG GACGATCTGC ATGATGCCGA GCCCAAGGAC
CGTGTGTCCT CGGGCATTGG CGAGCTGACG CGGCTGCAGC GCGCGGGCTA CACCTACATC
AAGCCGTGA
 
Protein sequence
MNPLSFLARP GWFLAGALFV LSLGVTWALF SFERDGGETA DADDTLQVVY HINADDPALH 
LNALRNLQNH IDGSAVDRLE IKVVMHGGGV SLLQHAKDDP DLRSTVDTLK MQDVRFLVCG
NTLDKRGIEL DDLHDAEPKD RVSSGIGELT RLQRAGYTYI KP