Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE2629 |
Symbol | |
ID | 2740803 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 2669469 |
End bp | 2671022 |
Gene Length | 1554 bp |
Protein Length | 517 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637161525 |
Product | peptide ABC transporter, periplasmic peptide-binding protein, putative |
Protein accession | NP_973227 |
Protein GI | 42528129 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000968343 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTAAACA AAACGATACG TGCACTGGGA CTGTGCGCTT TATGTGTAGT GCTGACGGTT TCGTGCAGCA AGGAGAAAAC TGCGGATATG CAGAGTCCTG CCGCCAAAAA AGATGCAGAT ATTGTGCTGA GAGAAGCAGG CGGAGATTTC GGCTATCCGA ACCCGTTTAG GCATCAAAAC CGCGGGCCGG GCTTTTTCAA AATGGAATTG ATTTACGATT CGCTTTTGGA AAAGGATGAA AAAGGCCTTA TCCCGTGGCT TGCAAAGGAA TGGTCTGTGA GCGAAGACGG ACAAACCTAT ACGTTCACGA TTGTCGATAA TGCAACGTGG CATGACGGAA AACCGCTGAC GTCGGAGGAC GTTGCGTTCA CGGTTAAGTA TTTTGAAGCA CACCCGCCGA TGCGCGGAGG CTTGATTCTG CACGGTAAGT ATCTGATGGA TTCCGTTACA GTCAACGGCA ATACGGTTAC GATTCACATT CCGGAATATA CGCCGACCGC GTTGGAAAAA ATCGGCAGTA TGCGCATCAT TCCCAAGCAT GTCTGGGAAA ATATCGAGGA TCCTGCAAAA TTTTCCGGTG AAGGCGATGT GGTCGGATCC GGTCCGTATA AATTGGTTTC CTATCAGAGC GAACAGGGTG CCTATAAAAT GGTGCGGTTT GACGAATTTT GGGGATTAAA ACCCGCCGTT GCCGCAATCG AATGGATTCC CGTTAGCGAC AACATCTTGG CATTTAATAA CGAAGAAATC GATATTACCA ACCTGCCTGC AGACCTTGTA AAAAATTACG AAAACAACAG CGAATTCAAA GTGGTTAAGA ATTTCGGCTT ACACGATTTC CGTTTCTATT TCAATTTTGA TAAGATTCCT GCGTTCCGTG ACAAAGAGGT TCGTCAGGCA ATCGCGTATG CCATAGACCG TAATGAACTA ATCGAAAAGC TTGAACGCGG TTCGGGACTG GAAGGCAGTC AAGGCTATCT GCACCCTGCG CACCCGATGT ACAACCCCAA TCTTCCTAAG TATGAGTTCA ACCCTGAAAA GGCAAAGGAG CTGATGAAGG GTAAAAAGAT TTCAGCACAG TTAACCGTGG GCAGTTCGCC CAAAGAGGTA AAGATGGCGG AGTTGATTAA AATCAGATTG GCGGATATCG GGATTACGCT GGATGTTGTC AGTGTCGACT CTAAAGCGCG GGACGGCATG ATCCGGGATA AGACCTATCA GACTGCGATT GTGGAATCGG GCGGTATGGG CGGTGATGCG GATATGCTGC GGGAAATTTA TTCCTCCAAA ACGAAGAAGC CGCACCTTGC AGGATATGCA AACGCACAGT TGGATGATCT TTTATACCGG CAATCTATAG AACGGAATGC GGAAACACGG AAGCAGCTGA TATATTCCAT TCAGGAAATT TTAGCGGATG AAATTCCCAT GTTGCTGCTC TACGGAAAAA TCGATAATAC GGTGTACCGT CCGGCAAAAT ACGACCGATG GACGGTGAGG TACGATCACG CTAAATTGGA TCATCCCAAG CTTTCGTATA TCATTCGTCC ATGA
|
Protein sequence | MLNKTIRALG LCALCVVLTV SCSKEKTADM QSPAAKKDAD IVLREAGGDF GYPNPFRHQN RGPGFFKMEL IYDSLLEKDE KGLIPWLAKE WSVSEDGQTY TFTIVDNATW HDGKPLTSED VAFTVKYFEA HPPMRGGLIL HGKYLMDSVT VNGNTVTIHI PEYTPTALEK IGSMRIIPKH VWENIEDPAK FSGEGDVVGS GPYKLVSYQS EQGAYKMVRF DEFWGLKPAV AAIEWIPVSD NILAFNNEEI DITNLPADLV KNYENNSEFK VVKNFGLHDF RFYFNFDKIP AFRDKEVRQA IAYAIDRNEL IEKLERGSGL EGSQGYLHPA HPMYNPNLPK YEFNPEKAKE LMKGKKISAQ LTVGSSPKEV KMAELIKIRL ADIGITLDVV SVDSKARDGM IRDKTYQTAI VESGGMGGDA DMLREIYSSK TKKPHLAGYA NAQLDDLLYR QSIERNAETR KQLIYSIQEI LADEIPMLLL YGKIDNTVYR PAKYDRWTVR YDHAKLDHPK LSYIIRP
|
| |