Gene TDE1603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1603 
Symbol 
ID2740844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp1653501 
End bp1654946 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content45% 
IMG OID637160485 
ProductABC transporter, ATP-binding protein 
Protein accessionNP_972209 
Protein GI42527111 
COG category[R] General function prediction only 
COG ID[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCATAG TAGAAGCAAG AATAAAAAAC TTCACCTATG AAAATGATGA AAGTCCCACG 
CTCCATGCCA TTGATTTGAG CATTGAAGAA GGCGAGCTCG TTGTGCTTAC GGGTTTTTCC
GGCTGCGGGA AGACTACCTT AACGCGGATA TTAAACGGCT TAATTCCCTA TCATTACGGC
GGAATACTCG ACGGTGAGGT GCGCATTTTA GGGAAGAACA TCTTGGATTA TAAAAAGGGC
GAATTGGCAA AGTACATCGG CAATGTGTTT CAAAATCCGA GTGATCAGTT TTTTGCTACC
ATTGCAGAGG AAGAGGTTGC CTTTGCCGGA GAAAATCTCG GTATGGATTC TCAAACCCTG
TGCGAAAAAA CCGATGCTGC TTTTCAAACG ATGCAGATAG AATCGCTTAA AGGTGCAAAA
CTTTCAGAGC TTTCCGGCGG GCAAAAACAA AAGGTCGCCA TCGCTTCCAC ACTCATCTAT
GACACAAAGC TGCTTTTTTT CGATGAGCCT TCTTCCAATC TCGACTATGA GGGTATTGTG
CAATTTCAAG CGATGATACG GGATTTAAAG GCGATGGGAA AAACGATTAT CATTGCCGAG
CACCGTTTAT TTTTCTTAAA TGAATTGTAC GATAAGCTCA TCTACATGAA AGACGGCACT
ATCGAAAAAA TCTTTTTGAA AGGTGAACTG ACAACAGAGG ATTGCAGGCG GTACGGACTG
AGGGCAATAC GGTATGACAG TCTTGTCTGC GAAAACCCTT CGGTACCGAA ACAAGCGGTT
ACGCATATCG AGGGTTTGAG CGTTTCTATC GGCAGACGAG AACTTATCAA AAATCTTTCG
TTTGATGTAC ACGCAGGAGA GATTACCGCC GTTATCGGAA AAAACGGTAT AGGAAAGACC
ACACTCGGCA AAGCTTTAGG CGGGCTTTTG TCTTGCAAGG GGCAGATCGG TTACGGGAAG
CGGCGGCGGC AGCGCTTAAG AAATGCGTAT TATATGATGC AGGATGTTGA CTATCAGATT
TTTTTTGATA CGGTAGAAAA CGAGCTTATT CCTTCTTCAA AACGGAAGGA TGAATCCTAT
TTGCAACAAG CGGCTGAGTA CCTGCGCACA ATTGACCTTT GGGAAAAAAG GCTTGACCAT
CCGCAGGAAC TTTCAGGCGG ACAAAAGCAG CGGCTCGCCC TTGCAACGGC ATTTTTGAGC
GGCAGGCGCA TCATCATCTT AGACGAGCCG ACCAGCGGCC TCGACTACAA ACGCATGGAC
GAAATCGCAA AGCTCATCTT ACACTGCGCT CAAGAAGTTT CCGTCCTCAT CATCACCCAC
GACTTGGAAC TCTTATTCAA AGTCTGCAAC ACCGCCCTCC TGCTCGGTGA AAACGCATAC
AAGAAAATTC CGGTAAACGG AAATGAAGGT GAAATTATTG GGTTTATGGG GAAACTTTCA
ATATAA
 
Protein sequence
MGIVEARIKN FTYENDESPT LHAIDLSIEE GELVVLTGFS GCGKTTLTRI LNGLIPYHYG 
GILDGEVRIL GKNILDYKKG ELAKYIGNVF QNPSDQFFAT IAEEEVAFAG ENLGMDSQTL
CEKTDAAFQT MQIESLKGAK LSELSGGQKQ KVAIASTLIY DTKLLFFDEP SSNLDYEGIV
QFQAMIRDLK AMGKTIIIAE HRLFFLNELY DKLIYMKDGT IEKIFLKGEL TTEDCRRYGL
RAIRYDSLVC ENPSVPKQAV THIEGLSVSI GRRELIKNLS FDVHAGEITA VIGKNGIGKT
TLGKALGGLL SCKGQIGYGK RRRQRLRNAY YMMQDVDYQI FFDTVENELI PSSKRKDESY
LQQAAEYLRT IDLWEKRLDH PQELSGGQKQ RLALATAFLS GRRIIILDEP TSGLDYKRMD
EIAKLILHCA QEVSVLIITH DLELLFKVCN TALLLGENAY KKIPVNGNEG EIIGFMGKLS
I