Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE1439 |
Symbol | |
ID | 2741402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 1484456 |
End bp | 1485445 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637160318 |
Product | epimerase/dehydratase, putative |
Protein accession | NP_972045 |
Protein GI | 42526947 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACATAG CAATAATAGG CGGTTCCGGT TTTATAGGAA CAAGACTAAC AAAGAGACTT TTAGCGTCCG GACATACAAT TAAAATTCTT GATAAACAGG ATAGTAAATA CTATCCCAAC TTGAGAGCCT TTGCTGATGT AAGGGATATA GATTCTTTAA AAAAAGAATT ATCCTCTAGC CTTGACTGCG TTATCAACTT GGCGGCTGAA CATCGCGATG ATGTTGAACC TAAAAGCTTA TATGATGAAG TAAATGTTGA CGGTGCAGAA AATGTATGCA AGGTCTGTTC GGAATTGGGA ATAAAAAAAA TTATTTTTAC AAGCTCTGTT GCGGTATACG GTTTTGCACC TTTAAATACG AACGAAACAG GTAAAATAAA TTATTTTAAT GATTATGGCA GAACAAAATG GCTTGCTGAA GGAAAATACC GTGCGTGGAT TGAAAACGAT AACGAAAATT CGCTTACGAT AATAAGACCT ACTGTTGTAT TCGGAGAGCA AAATAGGGGC AATGTTTATA ATCTATTAAG ACAAATCAGT TCAGGCTTTT TCCCATTTGT CGGAAACGGT AAAAATAAAA AATCAATGGC CTATGTTGAA AATGTAGCTG CCTTTATCGA ATTTTCTTTA AATAACGGAC AAGGTGAACA CTTATTTAAT TATCTAGATA AACCCGACTT TGATATGAAT TCTCTTGCCA ATGAAGTTTA TAAAATCTTA GGAAATAAGA ATCATAAAAT TTTTCATTGG CCCTATTGGC TGGGCTATTG CGGCGGTCTT TGCTTTGACT TACTTGCTAA AATATCGAGA AAAAAATTAG CAATCAGTTC AATCAGGGTA AAAAAATTCT GTGCCGATAC TCTTTTTGAT ACGATCAATA TACCTAAAAC CGATTTTAAG GCTCCCGTAT CTTTAAGCGA GGGCTTATAC AATACTATAA AATATGAATT CATTGATAAG ATTCAAGATC ATGTTTTTCA TACTGAGTAG
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Protein sequence | MHIAIIGGSG FIGTRLTKRL LASGHTIKIL DKQDSKYYPN LRAFADVRDI DSLKKELSSS LDCVINLAAE HRDDVEPKSL YDEVNVDGAE NVCKVCSELG IKKIIFTSSV AVYGFAPLNT NETGKINYFN DYGRTKWLAE GKYRAWIEND NENSLTIIRP TVVFGEQNRG NVYNLLRQIS SGFFPFVGNG KNKKSMAYVE NVAAFIEFSL NNGQGEHLFN YLDKPDFDMN SLANEVYKIL GNKNHKIFHW PYWLGYCGGL CFDLLAKISR KKLAISSIRV KKFCADTLFD TINIPKTDFK APVSLSEGLY NTIKYEFIDK IQDHVFHTE
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