Gene TDE1207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1207 
Symbol 
ID2740101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand+ 
Start bp1239376 
End bp1240308 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content40% 
IMG OID637160085 
ProductDNA processing protein DprA, putative 
Protein accessionNP_971814 
Protein GI42526716 
COG category[L] Replication, recombination and repair
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake 
TIGRFAM ID[TIGR00732] DNA protecting protein DprA 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.172047 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGATAT CCGAAAAAGA AAGTTTGTAC ATAGGATTAT CTCATTGCTA TTTTCTCAAA 
GGAAGGGAAA AGCTTGTTCT GTCGGAAAAG CTTGATTCCT TATCTTCTCT TGTGTCGCTT 
TCTCTAAAAG ATATTTCGGA AATTATCGGC AGGCAGGTAA GGCCCAAAAA ATGGGATAAA 
GATTTACTGA AATCCCTTAC GGATTCAAGT ATAAAACTTA TGAGCTCATA CGGCATAAGG 
ATGCTTTATT TTTATGATTC GGATTTTCCT CCGCAGCTTA GGGAGATTCC CGATCATCCA 
TTTACCGTTT TTTATAGAGG CCTTCTTCCT TCTCCTGAAC AGCCTATGCT TGCGATGGTA 
GGAACAAGGC GGCCTACGGG GGACGGAATT GAACAAGCCT TGAATTTGGG AAAAGAATGT 
GCCGAAAAAA ATATTCCTGT TGTGTCGGGA TTGGCTTTCG GTATAGATTG TTTTTCTCAT 
AAGGGCTGTC TTGAAGGAGA AGGTAAGACC TTGGCAGTAT TGGCCTGCGG GCCTGAAATG 
ATTTATCCCC GTTCAAATAA AAAACTTGCT GCAAATATTT TGGAATCTAG CGGTTGTATT 
TTAAGTGAAT ATGCTCCGGG AACGGAACCG TTGTCCTACC GCTTTCCCGA AAGAAATAGA 
ATTATTTCGG GACTTTCGCG TTCCGTTTTA ATTGTAGAAG CTCCAAAAAA ATCGGGTGCT 
CTTATTACTG CGGATTTTGC CTTGGAGCAG GGCAGAGATG TTTATGTATG CGGCCTTCTT 
CTTAATTCTT TACAAAATGA AGGCGGTAAA GCCCTTTACG AACAAGGCGC ATTTGCGATA 
AAATCCATAG ATGATATTTT ACATGATTGG AAATATCCTA CGGAAAATAA TTTAAGAAAT 
AATCAGCAAA ATATGCTGTT TACTAATTTA TAG
 
Protein sequence
MKISEKESLY IGLSHCYFLK GREKLVLSEK LDSLSSLVSL SLKDISEIIG RQVRPKKWDK 
DLLKSLTDSS IKLMSSYGIR MLYFYDSDFP PQLREIPDHP FTVFYRGLLP SPEQPMLAMV 
GTRRPTGDGI EQALNLGKEC AEKNIPVVSG LAFGIDCFSH KGCLEGEGKT LAVLACGPEM 
IYPRSNKKLA ANILESSGCI LSEYAPGTEP LSYRFPERNR IISGLSRSVL IVEAPKKSGA 
LITADFALEQ GRDVYVCGLL LNSLQNEGGK ALYEQGAFAI KSIDDILHDW KYPTENNLRN 
NQQNMLFTNL