Gene TDE0945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0945 
Symbol 
ID2740978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand+ 
Start bp967268 
End bp968380 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content51% 
IMG OID637159819 
Producthypothetical protein 
Protein accessionNP_971555 
Protein GI42526457 
COG category[S] Function unknown 
COG ID[COG1262] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.136664 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAAAT TAAATTTGAA CAAGAGCTCA GCCGCTTCAA GCGGCAGGCT CTGTGCACTG 
AAAAGAGCCG CGGCGCTCAT CATAGCCGCG TTGGTGGCGC TCATCATAGC CGCGTTGGTG 
GCGCCTATAG CGCTATTTGG AATGACCGGC TGCCCGAATA ATGCGGGCGG AGGCGGTTCG 
CCGCCCAATG TAGGTTCTGT TGAAGACACA GGCGACGGCT TTATAAAAAT AACCCCTCCT 
GCAAACGGCA TTGTAGGCGT TGCCCCTAAC TACGCCTTAC CCGGAAGTGA AGCTTGGTGG 
AAAGGCGTAT TTATTAAAGA CCGTAAGGTA AAATTAAGCC CCTACAAGCT CGGCAAAACA 
GAGGTAACCT ATAAACTGTG GAAAGAAGTT TACGACTGGG CGACTGGTCA TGGATATACA 
TTTGCCAATC CGGGAGTAAA AGGTAAAGAC GGAAGCGGAA CTGACGATGA GCCTGTAACG 
ACTATAAGCT GGAGGGACTG CATTGTGTGG TGTAATGCGT ATACTCAAAT GAAGGCTGAA 
GGTAAAGCCG ATACCGAATG CGTATACCGC AAAAAGGACG ATCATACGGT TGTATTAAAA 
GACGCGACGG CAACAGCTGA TTGTGATGCA GCGTATGCTG AGATGGGTAA AAAAGGCTTT 
AGACTTCCGA CAGAAGCCGA GTGGGAATAT GCGGCTCGCC GGCAGGGAAG CGATACAACA 
AATGCGGTGC AATACAGCGA TGTGTACCTT ACCAAATTAA ACAGTGCAAG CGGAGCGAAA 
GCTGACTGGA ATGATGCTGC GGAAACAGGA GCGGTTGCAT GGTATAGTGG TAATTCAGGA 
GGAAAAACTC ATCCGGTCGG AGAAAGGAGA GCGAATGCAC TCGGTTTACA CGATATGAGC 
GGTAATGTCT GGGAATGGTG TTTTGATTGG TACGACGATA TAGAGGCTAA CACAGTTACC 
GATCCTCAGG GTGGTGCGTC GGGTTCTTAC CGCGTCCTAC GCGGCGGCAG TTGGTACTTC 
TACGCGCACT ACTGCACTGT AGGCGTACGG GGCTACTACA GTCCTGACTA CTGGAGCTTC 
TATCTTGGCT TCCGCTTGGC TTGCCGGCCT TGA
 
Protein sequence
MIKLNLNKSS AASSGRLCAL KRAAALIIAA LVALIIAALV APIALFGMTG CPNNAGGGGS 
PPNVGSVEDT GDGFIKITPP ANGIVGVAPN YALPGSEAWW KGVFIKDRKV KLSPYKLGKT 
EVTYKLWKEV YDWATGHGYT FANPGVKGKD GSGTDDEPVT TISWRDCIVW CNAYTQMKAE 
GKADTECVYR KKDDHTVVLK DATATADCDA AYAEMGKKGF RLPTEAEWEY AARRQGSDTT 
NAVQYSDVYL TKLNSASGAK ADWNDAAETG AVAWYSGNSG GKTHPVGERR ANALGLHDMS 
GNVWEWCFDW YDDIEANTVT DPQGGASGSY RVLRGGSWYF YAHYCTVGVR GYYSPDYWSF 
YLGFRLACRP