| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0660 |
|---|
| Symbol | |
|---|
| ID | 2739208 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | - |
|---|
| Start bp | 696369 |
|---|
| End bp | 697274 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637159536 |
|---|
| Product | transcriptional regulator, putative |
|---|
| Protein accession | NP_971273 |
|---|
| Protein GI | 42526175 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2378] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTCGG AAAGACTTTT TGAAATCGTA TTTATCCTTC TCAGTCGGAA GCAGACAACT
GCACAAGAAC TTGCAAAAAA ATTCGGCGTA TCGGTTCGTA CTATTTATCG CGACATGGAT
ATTTTAAGCA GTGCAGGAAT CCCCGTGTAT ACGATGCAGG GTACCGGCGG AGGTATTTTT
ATCGATGAAA GCTACACAAT CAATAAATCA ATTTTGACAA AAGGAGAACA GGAGAAAATA
CTGCTTGCTC TGCAATGCCT TTCTCCAATA GATGAGATAC ACACCGAATC TATCTTAAAC
CGCTTATCTG CAATCTTTCA AAAAAATGCC GATTGGATCA GGATTGATTA TTCCCGCTGG
GACAACAAAA ACGATCATCA CCTTTTTAAA ACGCTTAAAG ATGCAATTTT AGAAAGAAGA
GCCGTCAAGC TGGAATATCT CAGCTCATAC GGAGAAAAAA CGGAACGAAC CGTCTACCCC
TTACGTCTTT TGTATAAATC GAAGGCTTGG TATGCCGAAT GCTATTGTAC AGAAAAAAAC
GCATGTAGAC TTTTTAGATT AACCCGTATA CTTTCTATTA TAAAGACTTT AAAAACATTT
AACCGTGCAG ACCTGCTCGG CAAAATACCT GACGATAAAA AAGCGGCACC GCCTCCCCTT
ACAAACATTA AATTAAAATG CACTGCTAAA ACCGCCTACA GACTCTACGA TGAATTTCCT
CCTGAACTTA TCGCAAAAAA TTCCGACGGC TCATATACCC TGAATGCAGC TCTCCCCTTT
GATTCGTGGG TCTGCGGTTT TATCTTGTCG CTCGGCACCG AAGTAGAAAT CCTTGAACCG
GAAAACTTAA AAACCGAAAT CGCCCAACTT GCAGAAGAAA TTATGAAAAA GCATAGAAAA
GTTTAA
|
|---|
| Protein sequence | MRSERLFEIV FILLSRKQTT AQELAKKFGV SVRTIYRDMD ILSSAGIPVY TMQGTGGGIF
IDESYTINKS ILTKGEQEKI LLALQCLSPI DEIHTESILN RLSAIFQKNA DWIRIDYSRW
DNKNDHHLFK TLKDAILERR AVKLEYLSSY GEKTERTVYP LRLLYKSKAW YAECYCTEKN
ACRLFRLTRI LSIIKTLKTF NRADLLGKIP DDKKAAPPPL TNIKLKCTAK TAYRLYDEFP
PELIAKNSDG SYTLNAALPF DSWVCGFILS LGTEVEILEP ENLKTEIAQL AEEIMKKHRK
V
|
|---|
| |