Gene TDE0190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE0190 
Symbol 
ID2741037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp226569 
End bp227456 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content39% 
IMG OID637159059 
Producthypothetical protein 
Protein accessionNP_970806 
Protein GI42525708 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAA CATCGAAACA AAAGGGTATT ATGTTTTTAA TTTTGTCGGC TCTTTGCTTT 
GCATCGATGA ATTTGTCGGC AAAGCTTGCC GGTAGTTTGC CTTCAATGCA AAAGGCTTTT
TTTAGAAATC TAATAGCGGC TGCTGTATCC TTTACCGTGC TTATAAATTC AAAAGAAAAA
TTTCATTTGA ATAAAAAAAA TCTGCCCTTC TTTTTTATGA GGGCAATTTT CGGCACTATG
GGGATTGTCG GAAACTTTTA TGCGATAGAG CACATGCTTC TTGCGGATGC TTCTATTCTT
GCAAAACTGG CTCCTTTTTT TGCCATTCTT TTTTCTTTTT TATTTTTAAA GGAAAAAATA
AAACTATATC AAATCCTTGC GGTAATCACA GCTTTTTCGG CAAGCCTTCT TATAATAAAA
CCGGCTTTTG CAGACACAGG CCATGTGATT GCAGCTCTTG TAGGGGCGTG CGGAGGAATG
ATGGCCGGTG CCGCCTATAC TTGCGTCCGC TGCCTTTCTC TTAAGGGTGA AAAGGGGCCT
CTCATAGTCT TTTTCTTTTC ATTTTTTTCG ATTTTAATGC TGTTTCCGCT TTTTATCATC
TTTTATCATC CGATGAGCCT TTATCAAATC ATTATGCTAT TGATTGCGGG CCTTTTTGGA
ACAGGAGGTC AGTTTTGTGT AACCGCAGCT TATGCTCATG CTCCGGCCGG TTCAATCTCG
GTCTATGATT ATACCCAAAT AGTTTTTTCT GCAATTTTCG GTTTTGCTTT TTTAGGAGAA
CTTCCCGACC GATGGAGCCT TTTAGGTTTT GCCATAATTT TTGCAGTGGC TCTTTTTATG
TTCTTACACC ACGAAGATAA GACAGAAGTT CATGTAGATT TAAATTGA
 
Protein sequence
MKLTSKQKGI MFLILSALCF ASMNLSAKLA GSLPSMQKAF FRNLIAAAVS FTVLINSKEK 
FHLNKKNLPF FFMRAIFGTM GIVGNFYAIE HMLLADASIL AKLAPFFAIL FSFLFLKEKI
KLYQILAVIT AFSASLLIIK PAFADTGHVI AALVGACGGM MAGAAYTCVR CLSLKGEKGP
LIVFFFSFFS ILMLFPLFII FYHPMSLYQI IMLLIAGLFG TGGQFCVTAA YAHAPAGSIS
VYDYTQIVFS AIFGFAFLGE LPDRWSLLGF AIIFAVALFM FLHHEDKTEV HVDLN