Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_12551 |
Symbol | |
ID | 5223233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | - |
Start bp | 2868256 |
End bp | 2871099 |
Gene Length | 2844 bp |
Protein Length | 947 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640607313 |
Product | amino acid decarboxylase |
Protein accession | YP_001288480 |
Protein GI | 148823726 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 219 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 176 |
Fosmid unclonability p-value | 0.0500695 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCCAA ACAGCGTCCG CCCGCGACGG CTGCATGTCT CCGCGCTGGC CGCGGTGGCC AACCCGTCCT ACACCCGCCT GGACACCTGG AACCTGCTCG ATGACGCGTG TCGTCACCTG GCGGAGGTCG ACCTCGCCGG GCTCGACACC ACACACGACG TGGCTCGGGC GAAGCGGCTG ATGGACCGCA TCGGCGCCTA TGAGCGGTAC TGGCTGTATC CGGGGGCACA GAATCTGGCG ACTTTCCGCG CTCATCTGGA TAGTCATTCC ACGGTGCGGC TTACCGAGGA AGTGTCGTTG GCCGTACGAC TGCTGTCCGA ATACGGCGAC CGCACAGCGC TGTTCGACAC CTCCGCGTCA CTGGCGGAGC AGGAGCTGGT AGCGCAGGCC AAACAGCAGC AGTTCTACAC CGTGCTGCTC GCCGACGACT CCCCGGCGAC GGCTCCGGAC AGCTTGGCCG AGTGCCTGCG GCAGTTGCGC AATCCGGCCG ACGAGGTGCA GTTCGAGTTG CTCGTGGTGG CCAGCATCGA AGATGCCATC ACCGCGGTGG CGCTGAATGG CGAGATTCAG GCGGCGATCA TCCGTCACGA CCTGCCGCTG CGGTCCCGCG ACCGGGTGCC GCTGATGACC ACGCTGCTGG GCACCGATGG CGACGAAGCG GTGGCAAACG AGACCCACGA CTGGGTGGAA TGCGCCGAGT GGATCCGTGA GTTGCGGCCC CACATCGACC TCTATCTGCT CACCGACGAG TCGATCGCCG CCGAGACCCA GGACGAGCCC GACGTCTACG ACCGCACCTT CTACCGGCTC AACGACGTCA CCGACCTGCA CAGCACGGTG CTCGCGGGTT TACGAAACCG TTATGCCACA CCGTTTTTCG ATGCGCTGCG GGCCTATGCG GCGGCGCCGG TCGGCCAATT TCATGCCCTT CCCGTCGCGC GCGGCGCCAG CATCTTCAAC TCCAAGTCAC TGCACGACAT GGGCGAGTTC TACGGCCGCA ACATCTTCAT GGCCGAGACC TCGACAACCT CTGGTGGACT GGACTCGCTG CTGGACCCGC ATGGCAACAT CAAGACGGCG ATGGACAAAG CCGCGGTGAC CTGGAACGCC AACCAGACCT ACTTCGTCAC CAACGGAACA TCGACCGCCA ACAAGATCGT CGTGCAGGCC CTGACCCGCC CCGGCGACAT CGTGCTCATC GACCGCAATT GCCACAAGTC GCACCACTAC GGCCTGGTAC TTGCCGGCGC GTACCCGATG TACCTCGACG CATATCCGCT GCCGCAGTAC GCGATTTATG GTGCCGTGCC GTTGCGCACC ATCAAGCAGG CGCTGCTGGA CCTCGAGGCC GCCGGACAGC TGCACCGGGT GCGCATGCTG TTGCTCACCA ACTGCACGTT TGACGGCGTG GTGTACAACC CGCGCCGGGT GATGGAGGAG GTGCTAGCGA TCAAACCGGA CATCTGCTTT TTGTGGGACG AGGCGTGGTA TGCGTTTGCG ACGGCGGTGC CCTGGGCCCG GCAGCGGACC GCGATGATTG CTGCCGAGCG ACTCGAGCAG ATGTTGTCCA CTGCGGAATA CGCTGAGGAA TACCGGAATT GGTGTGCGTC GATGGACGGA GTGGACCGCT CCGAGTGGGT TGATCACCGG CTGTTGCCAG ACCCCAACCG CGCTCGGGTC CGAGTGTATG CGACGCATTC GACTCACAAG TCGCTGTCCG CGCTACGGCA GGCATCGATG ATCCACGTGC GCGACCAGGA TTTCAAAGCG CTCACCCGGG ACGCGTTCGG TGAGGCATTC TTGACCCACA CCTCGACCTC GCCCAACCAG CAACTTCTCG CCTCGTTGGA CTTGGCGCGC CGACAGGTTG ACATCGAAGG GTTCGAGCTG GTCCGCCATG TTTACAACAT GGCGCTGGTG TTCCGCCATC GCGTCCGCAA AGACCGGCTG ATCAGCAAGT GGTTCCGCAT CCTTGACGAG TCCGACCTGG TTCCCGATGC CTTTCGGTCC TCGACGGTCA GCTCGTACCG TCAGGTCAGG CAGGGGGCTC TGGCCGATTG GAACGAAGCC TGGCGGTCCG ATCAATTCGT GCTCGATCCG ACGCGGCTCA CCCTGTTTAT CGGGGCGACC GGGATGAACG GGTACGACTT CCGCGAGAAG ATCCTGATGG AGCGATTCGG CATCCAGATC AACAAAACGT CTATCAACAG CGTGTTGCTG ATCTTCACGA TCGGCGTCAC CTGGTCGAGC GTGCACTATC TGCTCGATGT GTTGCGTCGG GTGGCGATCG ATCTGGACCG CAGCCAGAAG GCGGCCAGCG GGGCCGACCT TGCTCTACAC CGACGCCACG TCGAGGAGAT CACGCAGGAT CTGCCGCATC TACCAGATTT CAGCGAGTTC GACCTTGCCT TCCGCCCCGA CGACGCCAGC TCTTTCGGTG ACATGCGGTC GGCTTTCTAC GCCGGCTACG AAGAGGCCGA CCGTGAGTAC GTGCAGATCG GCTTGGCCGG GCGCCGGCTG GCCGAGGGCA AGACTCTGGT ATCCACCACG TTCGTGGTGC CCTACCCGCC CGGCTTCCCG GTACTGGTGC CGGGTCAACT GGTTTCCAAG GAGATCATCT ACTTTCTTGC CCAGCTCGAC GTCAAAGAGA TCCACGGATA CAACCCCGAC CTGGGGTTGT CGGTGTTCAC CCAGGCGGCA TTGGCCCGGA TGGAGGCCGC GCGCAACGCC GTCGCCACGG TAGGTGCCGC GCTGCCGGCC TTCGAGGTAC CGCGGGACGC TTCGGCTTTG AATGGCACCG TCAACGGCGA CAGTGTGCTG CAGGGGGTCG CCGAAGACGC GTGA
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Protein sequence | MNPNSVRPRR LHVSALAAVA NPSYTRLDTW NLLDDACRHL AEVDLAGLDT THDVARAKRL MDRIGAYERY WLYPGAQNLA TFRAHLDSHS TVRLTEEVSL AVRLLSEYGD RTALFDTSAS LAEQELVAQA KQQQFYTVLL ADDSPATAPD SLAECLRQLR NPADEVQFEL LVVASIEDAI TAVALNGEIQ AAIIRHDLPL RSRDRVPLMT TLLGTDGDEA VANETHDWVE CAEWIRELRP HIDLYLLTDE SIAAETQDEP DVYDRTFYRL NDVTDLHSTV LAGLRNRYAT PFFDALRAYA AAPVGQFHAL PVARGASIFN SKSLHDMGEF YGRNIFMAET STTSGGLDSL LDPHGNIKTA MDKAAVTWNA NQTYFVTNGT STANKIVVQA LTRPGDIVLI DRNCHKSHHY GLVLAGAYPM YLDAYPLPQY AIYGAVPLRT IKQALLDLEA AGQLHRVRML LLTNCTFDGV VYNPRRVMEE VLAIKPDICF LWDEAWYAFA TAVPWARQRT AMIAAERLEQ MLSTAEYAEE YRNWCASMDG VDRSEWVDHR LLPDPNRARV RVYATHSTHK SLSALRQASM IHVRDQDFKA LTRDAFGEAF LTHTSTSPNQ QLLASLDLAR RQVDIEGFEL VRHVYNMALV FRHRVRKDRL ISKWFRILDE SDLVPDAFRS STVSSYRQVR QGALADWNEA WRSDQFVLDP TRLTLFIGAT GMNGYDFREK ILMERFGIQI NKTSINSVLL IFTIGVTWSS VHYLLDVLRR VAIDLDRSQK AASGADLALH RRHVEEITQD LPHLPDFSEF DLAFRPDDAS SFGDMRSAFY AGYEEADREY VQIGLAGRRL AEGKTLVSTT FVVPYPPGFP VLVPGQLVSK EIIYFLAQLD VKEIHGYNPD LGLSVFTQAA LARMEAARNA VATVGAALPA FEVPRDASAL NGTVNGDSVL QGVAEDA
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