| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TBFG_10420 |
|---|
| Symbol | |
|---|
| ID | 5221084 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium tuberculosis F11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009565 |
|---|
| Strand | + |
|---|
| Start bp | 504318 |
|---|
| End bp | 505340 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640605161 |
|---|
| Product | thiamine biosynthesis oxidoreductase thiO |
|---|
| Protein accession | YP_001286365 |
|---|
| Protein GI | 148821611 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | [TIGR02352] glycine oxidase ThiO |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 322 |
|---|
| Plasmid unclonability p-value | 0.219353 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 207 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGTCCG ACCTACACAC CGGGTCGCTG GCTGTCATCG GCGGCGGTGT CATCGGGCTG
TCGGTGGCCC GCCGTGCCGC CCAAGCCGGC TGGCCGGTGC GGGTGCACCG CAGCGACGAG
CGGGGGGCGT CCTGGGTTGC CGGCGGCATG CTGGCCCCAC ACAGCGAAGG CTGGCCCGGC
GAGGAACGGT TGTTGCGGCT AGGCCTGCAG TCCCTGCGGC TTTGGCGTGA GGGCAGCTTT
CTCGACGGGC TGGGCCCGCA ACTGGTCACC GCGCACGAGT CGCTGGTGGT GGCCGTCGAC
CGGGCCGACG TCGCCGACCT GCGCACTGTC GCGGACTGGT TGTCCGCACA GGGGCACCCG
GTGATCTGGG AGTCGGCTGC CCGTGACGTC GAACCCCTAC TGGCGCAAGG CATCCGGCAC
GGGTTTCGGG CGCCCACCGA ACTGGCCGTC GACAACCGCG CCCTGCTCGA CGCGCTGTGC
CGTGACTGCG AGCGACTCGG AGTTCGCTGG AGCTCACAGG TGAGCAGCCT GTCCGACGTC
GATGCGCACA CGGTGGTGAT CGCCAACGGC ATTGACGCCC CGGCCTTGTG GCCCGGCCTG
CCGATACGCC CGGTGAAGGG TGAGGTGCTG CGGCTGCGAT GGCGACCAGG TTGTATGCCC
TTGCCGCAGA GAGTGATTCG TGCCCGTGTG CGTGGACGAC AGGTCTATCT GGTGCCACGT
TCGGACGGGG TGGTCGTCGG CGCCACCCAA TACGAGCACG GGCGCGACAC CGCGCCGGTG
GTATCGGGAG TTCGTGACCT GCTAGACGAT GCGTGTACCG TGCTGCCGGC GCTGGGTGAG
TACGAGCTGG CCGAGTGTGA GGCCGGACTG CGCCCGATGA CACCCGACAA CTTGCCGCTG
GTCCAACGCC TGGATTCGCG GACCCTGGTC GCGGCCGGTC ACGGCCGATC CGGATTCCTA
TTGGCGCCGT GGACTGCCGA ACAGATTGTG TCCGAACTCG TTTCGGTTGG GGCCGCCTCA
TGA
|
|---|
| Protein sequence | MASDLHTGSL AVIGGGVIGL SVARRAAQAG WPVRVHRSDE RGASWVAGGM LAPHSEGWPG
EERLLRLGLQ SLRLWREGSF LDGLGPQLVT AHESLVVAVD RADVADLRTV ADWLSAQGHP
VIWESAARDV EPLLAQGIRH GFRAPTELAV DNRALLDALC RDCERLGVRW SSQVSSLSDV
DAHTVVIANG IDAPALWPGL PIRPVKGEVL RLRWRPGCMP LPQRVIRARV RGRQVYLVPR
SDGVVVGATQ YEHGRDTAPV VSGVRDLLDD ACTVLPALGE YELAECEAGL RPMTPDNLPL
VQRLDSRTLV AAGHGRSGFL LAPWTAEQIV SELVSVGAAS
|
|---|
| |