| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_B2627 |
|---|
| Symbol | |
|---|
| ID | 3772747 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007595 |
|---|
| Strand | + |
|---|
| Start bp | 17687 |
|---|
| End bp | 18748 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637798376 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_398724 |
|---|
| Protein GI | 81230346 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.0414836 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAACCG CCACCCTGTT AAACGAGATT CAAGCGCTCT CTGCTGCCGA TCCTGAGCAT
CGCTCTCAAA GCCTCGATAT CCTCCAGCTC ATTGCCCAAG CAGGCTGGCT AGGCCTCGGG
ATCGATCGCC AACAGGGTGG TAACGGTGGC TCCATTCTGG ATGCAGTCGA AGCGATCGCC
GCAGTCTCTG AAGTCTGTCT GACCAGCGGC TTTGCCTTTT GGTGCCAACG GACATTTATC
CAGTACCTCG TTACCAGCGA GAACGACTGG CTGAAATCTG AGATCCTCCC GATCGTCCTA
CGAGCTGAGC GGGCCGGCGC AACGGGCATG TCCAACGCCA TGAAGCATCT CTCAGGTTTG
GAACCCCTGC GGCTCAAAGC TGAACGGCAA ACAGGCAGCA TCCAACTGCA AGGCTCCTTG
CCCTGGGCCT CCAATCTCGT CCCTGAGCAG TTTTTTGTGG CGGTTGCCAC GGAAACCTGT
GACGGAGAAG TCGTGATTGT GGCGATTCCT TCCCATGCCA TCGGGGTTGA ACGCAGCCCC
GACTTTGACT TGCTAGGAAT GGTGGCGGCT TCCACAGGGG CACTCAACTT CGATCAGGTC
TGGCTGCCCG ATCGCTGGAT TATTGCCGAG GCAGGGCGGG CCTTCTTGCC CAAAGTACGC
CCGAGCTTTC TGCTCTTTCA GTGTGGTTTG CCGCTAGGAA CGATTCGAGC GGCGCTTAAA
GCGATCGCCC CAACTTTGAG TGGCCCCAGT GCTGTCCTCA ATCCCCGTTA TGCCCAAGCC
CAAATTCAGC TGGAGGGACT GACTGCCGAT CTCCATTTCT TGGCACAGCT TGGTGAATTC
TCACTGCCCC AACTGCGCCA GTTATTCGAA TTACGGATTG CCCTGACTCG CCTCGCAACC
AAGGTAACTT GGTTGGAACT CGAAGCTCGG GGTGGCAGGG GCTACCACGC CGGTAGTACG
GCCAAACGGC TGCGAGAAGT GGCCTTTTTG CCGGTGCTGA CTCCGAGCTT GGTGCAACTG
GAGCGCGAAC TACAGCGCAC AGCTGTCGAG GCGGCGGCAT GA
|
|---|
| Protein sequence | MPTATLLNEI QALSAADPEH RSQSLDILQL IAQAGWLGLG IDRQQGGNGG SILDAVEAIA
AVSEVCLTSG FAFWCQRTFI QYLVTSENDW LKSEILPIVL RAERAGATGM SNAMKHLSGL
EPLRLKAERQ TGSIQLQGSL PWASNLVPEQ FFVAVATETC DGEVVIVAIP SHAIGVERSP
DFDLLGMVAA STGALNFDQV WLPDRWIIAE AGRAFLPKVR PSFLLFQCGL PLGTIRAALK
AIAPTLSGPS AVLNPRYAQA QIQLEGLTAD LHFLAQLGEF SLPQLRQLFE LRIALTRLAT
KVTWLELEAR GGRGYHAGST AKRLREVAFL PVLTPSLVQL ERELQRTAVE AAA
|
|---|
| |