Gene Synpcc7942_2327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2327 
Symbol 
ID3774610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2394295 
End bp2394768 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content46% 
IMG OID637800775 
Producthypothetical protein 
Protein accessionYP_401344 
Protein GI81301136 
COG category[S] Function unknown 
COG ID[COG3431] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCCCC GATATCGTCG CCTTGCGAGA CTCGGACAAC TCTGGAGTGA CTCAGACAGT 
TTTCTGACGC TCGTTAGTAG TCTCGAAAAG TTCATTGCCA AGGTATTGTC GCTGGCAATG
ATTGTTGTGA TCATTGTCTC GACGATTGAC CTCGGTATCT TCTTGGTCAA AAATTTATTT
GTCTTTGATC CTTTCTTCCT CAAGTCCGCT CTATTCGAAG TTTTTGGGAT GTTTTTGAGT
GTCTTAATTG CCCTCGAAAT CCTCGAGAAT ATCACCGCTT ATCTCCGGCG CAATGTCATC
CAAGTTGAAC TAGTTGTTGC GACCTCTTTG ATTGCGATCG CTCGTAAATT AATCATTCTC
GACGTCAACA AAATTTCTAC GGGCGAACTT TTTGGACTCG GCTTTGCAGT GCTTGCTCTA
GCCATTAGCT ACTGGATTGT GCGATCGGCA CCCGCTCGCA ATTCTCATCA CTAG
 
Protein sequence
MAPRYRRLAR LGQLWSDSDS FLTLVSSLEK FIAKVLSLAM IVVIIVSTID LGIFLVKNLF 
VFDPFFLKSA LFEVFGMFLS VLIALEILEN ITAYLRRNVI QVELVVATSL IAIARKLIIL
DVNKISTGEL FGLGFAVLAL AISYWIVRSA PARNSHH