Gene Synpcc7942_2116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2116 
Symbol 
ID3774335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2197290 
End bp2198150 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content58% 
IMG OID637800561 
Producthypothetical protein 
Protein accessionYP_401133 
Protein GI81300925 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.537851 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.60451 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCTGC GATCGCTCCT CCTGATCCTC CTTGGCTGTG GGAGTGTCGT TCTGCTGTTT 
CTGGCGGCAA TCTGGCTGGG ACAGTCGCGG CTGATTTTCC GTCCTGCTAA GGATGAGCCT
ATCCCGGAAT CGCTGCTGGC CTATCAGCCC GCAGAGGTCT GGATTGCCCT GCAGCCCCAA
GCAGTGCGAT CGCCTCGGCT CCAAGCCTGG TGGTTTCCCA ATCAGGGGGT TACTCCTTGG
ACCGTTCTCT ACCTGCACGG CATTCAAGGG CGCTGGGTCG ACACGGAAGA TCGACTCTTG
CAGTTGCTCT CCTTGGGGCT ATCAGTGCTA GTTCTGCAAT ATCGCGGTTA CGGACGCAGC
TCTGGCCCTT TCCCCAACGA GCAACGGGTC TACGCGGATG CTGAAGCGGC AGTTGCCTAT
CTGGCCAAGG AACACGCCAT TCCCAGTGAT CGCTTGTTAG TTTATGGCCA CTCTTTGGGT
GGTGCGATCG CGGCTGAGCT AGCTAACCGT CAGCCCAAAC TAGCAGGCTT AATTCTGGAG
GGATCCTTCA GCTCGATGCG GGCGATGACT CAATATCGGC AGCGGTTTGC TTGGTTCCCC
AACTGGCTCT TGCACCAACG CTTTGATACC CTCGCTAAAG TGCGGCAGTC GTCGGTACCG
GTGTTAATTC TGCACGGTGA AGCAGATACC GAGGTGCCAG CCCTAATGAG TGAAGCCCTG
TTCTTGGCCG CTGCAGGGCC AAAGCAACTC TGTCGGATTC CCGATGGGGG GCATAACGAC
TTGCCGAAGC TGGCAGGCGA TCGCTATCGA CAGGCTGTTC AGCGTTTTCT CGATTTAGTG
GCTGCGCGAT CGCGAGCCTA G
 
Protein sequence
MLLRSLLLIL LGCGSVVLLF LAAIWLGQSR LIFRPAKDEP IPESLLAYQP AEVWIALQPQ 
AVRSPRLQAW WFPNQGVTPW TVLYLHGIQG RWVDTEDRLL QLLSLGLSVL VLQYRGYGRS
SGPFPNEQRV YADAEAAVAY LAKEHAIPSD RLLVYGHSLG GAIAAELANR QPKLAGLILE
GSFSSMRAMT QYRQRFAWFP NWLLHQRFDT LAKVRQSSVP VLILHGEADT EVPALMSEAL
FLAAAGPKQL CRIPDGGHND LPKLAGDRYR QAVQRFLDLV AARSRA