Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1839 |
Symbol | |
ID | 3774414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1906094 |
End bp | 1906834 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637800280 |
Product | hypothetical protein |
Protein accession | YP_400856 |
Protein GI | 81300648 |
COG category | [R] General function prediction only |
COG ID | [COG1075] Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.028666 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCCAG TCAGCACCAG TTCTGCGCAG CCTGCCACAA CTGTCCAAGG CTTGCCGACG GTTATCCTGC CGGGCTACTT AGCGGGTGCT GCACCCTATC AGCCCTTGGC ACAGTGGCTG AGCGATCGCG GTTTTCTAAC CACGGTGGTG CCGCTCCAAC GCAGCGACTG GTTCCCGACT TTGGGCGGTA GACCCGTGAC GCCGATCCTA GAGGCGCTGG AAGCGACGGT TGCTCAAGTT CTGGCAGCCA CAGGTGCAGC GAAAATCAAT TTGATCGGCC ATTCAGCCGG CGGCTGGATT TCACGAATTT GGTTGGGCGA TCGCCCCTAT GGGCCGACTC AGCAGGCTTG GCAGGGACGC GATCGCACGG CAGTGCTGAT CTGCCTTGGC ACCCCGCACC GCAGCCAAGA GCGCTGGACA CGCCGCAATA TCGATTTCGT CAATGAGCAC TATCCAGATG CATTCTTCAA AGATGTTCGC TACGTCTGTG TCGCCGGTAA AGCCGTACAG GGGGCGCGCC GCTGGGGACA GTGGGTGGCT TACAACAGCT ACAGCTTAAC GATCGGTCAA GGCGACAGTT GGGGCGATGG GATCACGCCG ATCGCGGCCG CCCACCTCGA AGGCGCTTTG AATCTAACCT ACGAGGCGGT CTATCACTCA CCCCGCCCGA ATCGACTCTG GTATGGCAGC CCAGAAATTG CCGAACAGTG GCGATCGCAC CTGGTTACAA CAGCGGCGTA A
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Protein sequence | MDPVSTSSAQ PATTVQGLPT VILPGYLAGA APYQPLAQWL SDRGFLTTVV PLQRSDWFPT LGGRPVTPIL EALEATVAQV LAATGAAKIN LIGHSAGGWI SRIWLGDRPY GPTQQAWQGR DRTAVLICLG TPHRSQERWT RRNIDFVNEH YPDAFFKDVR YVCVAGKAVQ GARRWGQWVA YNSYSLTIGQ GDSWGDGITP IAAAHLEGAL NLTYEAVYHS PRPNRLWYGS PEIAEQWRSH LVTTAA
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