Gene Synpcc7942_1830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1830 
Symbol 
ID3774405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1899227 
End bp1899550 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content49% 
IMG OID637800271 
Productthioredoxin 
Protein accessionYP_400847 
Protein GI81300639 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID[TIGR01068] thioredoxin 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.260875 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGTAG CTGCCGCTGT GACAGACGCC ACTTTCAAGC AAGAAGTGCT CGAAAGTAGT 
ATTCCGGTAC TGGTTGATTT TTGGGCGCCT TGGTGTGGAC CTTGTCGGAT GGTTGCTCCT
GTTGTCGATG AGATTGCTCA GCAATATTCC GATCAAGTCA AAGTTGTCAA AGTCAACACG
GACGAAAACC CCAGCGTTGC GAGTCAGTAT GGGATTCGTA GCATCCCAAC GCTGATGATC
TTTAAAGATG GTCAGCGGGT AGATACGGTT GTTGGTGCTG TTCCCAAAAC CACCTTGGCG
AACACGCTAG ATAAACATCT CTAG
 
Protein sequence
MSVAAAVTDA TFKQEVLESS IPVLVDFWAP WCGPCRMVAP VVDEIAQQYS DQVKVVKVNT 
DENPSVASQY GIRSIPTLMI FKDGQRVDTV VGAVPKTTLA NTLDKHL