Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1830 |
Symbol | |
ID | 3774405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 1899227 |
End bp | 1899550 |
Gene Length | 324 bp |
Protein Length | 107 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637800271 |
Product | thioredoxin |
Protein accession | YP_400847 |
Protein GI | 81300639 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3118] Thioredoxin domain-containing protein |
TIGRFAM ID | [TIGR01068] thioredoxin |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.260875 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGTAG CTGCCGCTGT GACAGACGCC ACTTTCAAGC AAGAAGTGCT CGAAAGTAGT ATTCCGGTAC TGGTTGATTT TTGGGCGCCT TGGTGTGGAC CTTGTCGGAT GGTTGCTCCT GTTGTCGATG AGATTGCTCA GCAATATTCC GATCAAGTCA AAGTTGTCAA AGTCAACACG GACGAAAACC CCAGCGTTGC GAGTCAGTAT GGGATTCGTA GCATCCCAAC GCTGATGATC TTTAAAGATG GTCAGCGGGT AGATACGGTT GTTGGTGCTG TTCCCAAAAC CACCTTGGCG AACACGCTAG ATAAACATCT CTAG
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Protein sequence | MSVAAAVTDA TFKQEVLESS IPVLVDFWAP WCGPCRMVAP VVDEIAQQYS DQVKVVKVNT DENPSVASQY GIRSIPTLMI FKDGQRVDTV VGAVPKTTLA NTLDKHL
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