| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1575 |
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| Symbol | |
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| ID | 3774999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 1636580 |
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| End bp | 1638625 |
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| Gene Length | 2046 bp |
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| Protein Length | 681 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637800008 |
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| Product | glycogen debranching protein |
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| Protein accession | YP_400592 |
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| Protein GI | 81300384 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3408] Glycogen debranching enzyme |
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| TIGRFAM ID | [TIGR01561] glycogen debranching enzyme, archaeal type, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.866543 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATTA CTTTCGGCCG AGAGATTTGT AGTGATCTCG CGATCGCCCA GCAGCGCGAA
TGGCTGGTCA CTAACGGAAT TGGTGGTTAC GCCTCAGGCA CGGTCGCTGG ACTTCCGACT
CGCAGCTACC ACGGACTTTT AGTAGCAGCG CTGAAGCCAC CCCTCGATCG CACCTTGCTA
GTCACACATC TCGATGAGCA AGTCGACTAT GGCAAGCTAT CGCTGCCTTT GAGTACGACC
CGCTGGGTTG ACGGCACCGT TGCTCCTCGA GGCTACGAGC AGATTGAGCA GTTTGGGTTG
GAGGGCACCA TACCGGTCTG GCAATTTGCG ATCGCCGATG CCCGACTAGA AAAGCGAATC
TGGATGGAGC CGGGCGCCAA CACCACCCTT ATTTCCTATC GTTTTGAACG GGGCAGTCTG
CCGCTGCAGC TTACCGTTAA GGGGCTGGTC AACTATCGCG GTTACCACAG TCGCACCCAG
GCGGGCGATT GGCGCATGGA TGTGCAGCCC GTCGATCGCG GCTTGAAGGT AACAGCTTTT
CCAGAAGCGA CTCCTTTCTA TTTGTTCGCA ACTTGGGGCA AGTGGGCGAT CGCCCCTGAG
TGGTATCGCG ACTTTGAGCT GGCAGTTGAG GCCGAACGAG GACTGGACGA TCGCGATGAC
AACCTGAGGG TGGGTTCGCT GACGGTGACG CTCAATCCCG GTGAGACGCT TTGCCTTATT
GCCAGTACTG AAGCCAGCCC GGATCTGGAT GCGGCGGCTT CCCTCCAGCG CTACCAAGAT
CGGACGCAAG CCAAGCTCCA ACAATGGCAG GCAGCGAATC CGACCTTGGC GGATCAAGCC
CCTGATTGGG TGCGGCAACT GGTGTTGGCG GCAGATCAGT TCATTGTCGA TCGTCCGCTG
CCCAATCATC CCCAGGGCAA AAGCATTCTC GCGGGTTACC ACTGGTTCGC CGACTGGGGT
CGAGACACGA TGATCAGCCT ACCGGGGTTG ACGCTAGCGA CAGGTTGGCC CGATCTCGCC
CGAGAAATTC TGCTCACGTT CGCCCAGTTT GTTAGTCAGG GAATGTTGCC TAATCGCTTC
CCTGACGATG GCAATCCCCT CACCGATGCC GACTACAACA CGGTGGATGC CACCCTTTGG
TATGTGGAAG CTGTCCGTCA ATACCTCGAT TGCAGTGGGG ATAAGACGCT ACTGGCCGAG
ATTTTTCCAG TGCTGCAGAA CATCATTGGC TGGCATCAAC GGGGCACCCG CTTCAATATT
CACCTTGATC CTCAAGATGG TCTGCTGACT GCGGGAGCAG CAGGTGTGCA GCTCACTTGG
ATGGATGCCA AAGTTGGCGA CTGGGTAGTG ACGCCTCGCA TTGGTAAGCC AGTCGAGATC
AATGCCCTTT GGTATGCCGC CCTGCGATCG CTGGCTCACT TTGCTCGGTG TTTAGGGCAG
CCCAGCACTG ACTACGACCA ACTGGCAGAA GCGACCTTGC AGGGATTTCA GCGGTTTTGG
CAAGCAGATC GGGGCTACTG TTTCGATGTA CTCGACAGCC CCACGGGGTC AGATGCTAGC
CTACGCCCCA ATCAACTGCT AGCAATTTCC CTCGGTTGCG ATCGCGATCA GCCGGCACTA
CTCACGCCTG ACCAGCAACA ACAGGTGGTG ACCCTCTGCG GTCAGCAGTT ATTAACGTCT
TTTGGACTGC GGAGTCTCGA TCCTCGTCAT CCGCAATATC AGGGGCACTA CGGCGGCGAC
CAAACCCAGC GCGATGCGGC TTATCACCAA GGCACCGTTT GGGCTTGGCT CTTGGGCTCT
TTTGCGATCG CCCACTATGC CGCCTTTGGC GATCGCGCCT TGGCAGCTCA GGTTTTGCAA
CCGATCGCCC ATCACTTGCA AACTGCAGGG CTGGGAACGA TTAGCGAAAT CTTTGATGGC
GATGCACCCT TTCTCCCGCG CGGCTGCATT GCCCAAGCTT GGTCCGTGGG TGAAATTCTG
CGCGCTTGGA CAGTGATTCA CCAGACGGCA GTGTCCCCTG ATCCTGCTGC GATCGCTCTG
ACCTGA
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| Protein sequence | MTITFGREIC SDLAIAQQRE WLVTNGIGGY ASGTVAGLPT RSYHGLLVAA LKPPLDRTLL
VTHLDEQVDY GKLSLPLSTT RWVDGTVAPR GYEQIEQFGL EGTIPVWQFA IADARLEKRI
WMEPGANTTL ISYRFERGSL PLQLTVKGLV NYRGYHSRTQ AGDWRMDVQP VDRGLKVTAF
PEATPFYLFA TWGKWAIAPE WYRDFELAVE AERGLDDRDD NLRVGSLTVT LNPGETLCLI
ASTEASPDLD AAASLQRYQD RTQAKLQQWQ AANPTLADQA PDWVRQLVLA ADQFIVDRPL
PNHPQGKSIL AGYHWFADWG RDTMISLPGL TLATGWPDLA REILLTFAQF VSQGMLPNRF
PDDGNPLTDA DYNTVDATLW YVEAVRQYLD CSGDKTLLAE IFPVLQNIIG WHQRGTRFNI
HLDPQDGLLT AGAAGVQLTW MDAKVGDWVV TPRIGKPVEI NALWYAALRS LAHFARCLGQ
PSTDYDQLAE ATLQGFQRFW QADRGYCFDV LDSPTGSDAS LRPNQLLAIS LGCDRDQPAL
LTPDQQQQVV TLCGQQLLTS FGLRSLDPRH PQYQGHYGGD QTQRDAAYHQ GTVWAWLLGS
FAIAHYAAFG DRALAAQVLQ PIAHHLQTAG LGTISEIFDG DAPFLPRGCI AQAWSVGEIL
RAWTVIHQTA VSPDPAAIAL T
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