Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1330 |
Symbol | |
ID | 3775523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1362508 |
End bp | 1363164 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637799761 |
Product | hypothetical protein |
Protein accession | YP_400347 |
Protein GI | 81300139 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGTTG TTGGACCTTG GCTGACTGCC GAACAGCGCA GCAAACTCGA TGGCAGTGAT GATGCCCTGT TCTACGAACA GCCGCGCTTT GTCACCCACG TGGATGACGC CTTCCTGAAG CGCTTAACGC AGCTCTATCG CGAACGCCTG CAGCCCAACA GTCAGGTGCT GGATCTGATG AGTAGTTGGG TCTCGCATCT GCCGGAGGAA ATGCTCTTCG CGACGGTGGT TGGCCACGGT CTCAATGCCC AGGAACTCGA CCGCAATCCC CGCTGCGATC GCTGGTTTGT TCAGAACCTC AATCAACAGT CCGCACTCCC CGAGCTGGAC AGTAGCTTTG ATGCTGTCTT GATCGCAGTC TCAGTGCAGT ATCTGCAGCA GCCCGAACAG GTGTTGGCAG AGGTAAGACG TGTCCTCCGT CCGGGCGGGC AGCTAATTAT CAGCTTCTCC AATCGCCTCT TCTACTCCAA AGCGATCGCG GCTTGGCGCG ACGGCAGTGA TGCCCAGCGT TTGGCTTTGG TGCAGCACTA CATTCGCCAG ACGGCTGGAT TTAGTGAACC GGAAGTGATT GCAGAAGTCT CACCCGCTCT GGGCTGGCAG CAGTGGTTGG GGCTAGGACA AGATCCCTTC TACGCCGTAC TGGCAAGAGC AGTCTGA
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Protein sequence | MAVVGPWLTA EQRSKLDGSD DALFYEQPRF VTHVDDAFLK RLTQLYRERL QPNSQVLDLM SSWVSHLPEE MLFATVVGHG LNAQELDRNP RCDRWFVQNL NQQSALPELD SSFDAVLIAV SVQYLQQPEQ VLAEVRRVLR PGGQLIISFS NRLFYSKAIA AWRDGSDAQR LALVQHYIRQ TAGFSEPEVI AEVSPALGWQ QWLGLGQDPF YAVLARAV
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