| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1324 |
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| Symbol | |
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| ID | 3775517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 1352829 |
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| End bp | 1355588 |
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| Gene Length | 2760 bp |
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| Protein Length | 919 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637799755 |
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| Product | DEAD/DEAH box helicase-like |
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| Protein accession | YP_400341 |
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| Protein GI | 81300133 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4581] Superfamily II RNA helicase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTGAAG CCGAATGGGT CACAATTGAA GGGTCGCCCT CAATTCTGGA TGTGCTCGTG
AGTCAGACTG AAACAGCCTT TTCGCTGGAT GTGGCGACGC TGTTTCCGTT CGAGCTAGAT
GATTTCCAGA AAGAGGCGAT CGCGGCACTG GATCAAGGGC GATCCGTCGT CGTTTGTGCT
CCCACCGGTT CTGGCAAAAC GCTGATCGGT GAATATGCAA TCTACCGAGC GCTGGCTCGG
GGCAAACGCG TTTTTTACAC CACGCCGCTC AAAGCCCTCT CCAATCAAAA GCTGCGGGAC
TTTCGTGAAC AATTCGGCAG CGATCGCGTT GGACTGCTGA CGGGCGATAC TTCGATCGCG
CGGGATGCGC CGATTGTGGT CATGACGACC GAGATCTTCC GCAACATGCT CTACGGCACG
CGGATTGGTG AGGTCGGCAC CTCGATGATT GATGTCGAGA CAGTAGTGCT GGATGAATGC
CACTACATGA ACGACCAGCA GCGTGGCACC GTCTGGGAAG AGTCGATCAT CTACTGTCCG
CCGACCGTGC AATTAGTGGC GCTGTCCGCA ACGGTCGCCA ATGGCGGTCA ACTGACCGAT
TGGATCGACC AAGTTCACGG TCCGACTGAC TTAATCTATT CGGACTATCG GCCGATTCCC
CTTGCCTTCA GCTTCTGCGG CAACAACGGC TTGTTCCCAT TGCTGGATGA GACAGGCAAA
TCTATTCATC CATCCTTCAA GGTGCGGCGC AAGACCAAGG GCGCCAAGCA CGATCGTAAA
GGGCGGGAAA TTCCTGAGAT TCCCTCCCTC GGCTTTGTAG TGGGTCAGCT GCAACAGCGG
CAGATGCTGC CGGCGATCTA CTTCATCTTC AGCCGGCGGG GTTGCGATAA AGCCGTGCGT
GATCTCGGGC CAATCTCCCT AGTCAACGCC GACGAAGCCG CCCGACTCAA GCAGCGGGTC
AACGCTTTTC TGGCCCAAAG TCCCGAAGCG GCGCGATCGG GCCACGTTGA GCCACTCTTG
CGCGGCATTG CCTCCCACCA TGCCGGGGTG TTGCCAGCCT GGAAAGGCTT GATTGAAGAG
CTCTTTCAGG AAGGCCTAGT CAAGGTTGTT TTCGCCACCG AAACCCTAGC GGCAGGCATC
AACATGCCAG CACGGACGAC GGTGATTGCT AGCCTCTCAA AGCGAACCGA TAGCGGCCAT
CGGCTGCTGT TGCCCTCTGA GTTCCTGCAG ATGTCGGGTC GGGCTGGTCG GCGCGGCTTG
GATGATCAGG GCTACGTCGT CACGGTTCAG TCTCGTTTTG AGGGATCCCA GGAAGCCGCT
CACCTCGCAA CCGTGGGACC CGATCCGCTG GTCAGCCAGT TCACGCCCAG CTACGGCATG
GTCTTGAACC TGTTGCAAAA GCACAGCCTC GAAGAAGCGA AGGAGTTGGT CGAGCGCAGT
TTTGGTCGCT ACCTCGCTAG TCTCTCGCTC AAGCCAGAGC AGGAGAAAAT TGCCGCGATC
GCTGCTGAGC GCGATCGCCT CCAAGCAGAG CTGGCGGATG TTGATTTTGC GACTCTTGCT
GAGTACGACA AACTCTACGG TCGCCTCAAG GAAGAAAAGC GGCTGCTCAA AATCCTGCAC
GAGCAAGCGG AAGAGGTCGT CCATCGCGAT TTAGCTATGG CTCTCTCCTT TGCTGTGGCG
GGCACCATCC TCAGCCTCAA GGGTCGCCAT GTGCCGGTGC CCGAGCCGCT GCCTGCTGTG
CTAATTGCTA AGATTCCTGG CTCAGGCCAG TTCCCTTGGT TGCTCTGCTT GGGTATGGAC
AACCGCTGGG TTGTTGCGAC GACCTCGGAT GTCGTCGGGT TGCATGCTGA ACTTGCCCGC
ATCAGCGCTG TTGATTTCCT TCATCCACCG GCACAGCTGC ACAAACCGGG TCAGCATCAC
AAGGGTGATG AAGCAACAGC TTGGATTGCT GAAAAGTTGT GGGAATTGAG CCAACGGCAT
CACCTCGCCC TCGCGGGCAG TGATCTGGCT GAAGAGGTGG TGCAGCAGGC GGAGCAAGTC
GAAGCGGTCA ATACGCTTTT GATCAACCAT CCAGTGCATT GCTGGCAGAA CCGCAAGCGC
CTGCATAAAC GCCAGCAACA GTTGCAAGCG CTGGAGGATG AAATCGGCGA TCGCCGGGCT
CGCCTCGAAA AATTGGGGCA GCGCCACTGG CAGGAGTTCC TCAGCTTGAT GAGTATCTTG
GAAAACTTCT CCTGCTTAGA AGACCTGAAA CCAACGGAAA TGGGTCAGAA CGTTGCGGCT
CTCCGAGGCG ACAACGAGCT CTGGTTGGGC CTTGTCCTCA TGAGTGGAGA ACTCGACGGT
TTGACACCCG CTGAATTTGC CGCTGCTAGT GAAGCCTTGG TCACGGAAGT TTCACGGCCC
GACCTTTGGA CGCGTTTTGA TGTGCCGCCT GCTGTGGAAG ATGCCCTGAT GGGGGTGCGC
GGTCTACGGC GTCAGCTGCA GCAACAGCAA AGTCGCCGCA ATGTCTTTAC ACCGATTTGG
CTCGAACTCG ATCTAACCGG TCTGGTCAAA GCCTGGGCAG AAGGCATGGA GTGGAATGAA
CTCTGTGCGG CTACCAGCCT TGATGAGGGC GATATTGTGC GCGTGCTGCG CCGCACGATC
GATTTCCTCG CTCAAATTCC CCACATGCCC TACCTACAAG GGGGTGTGAA AAATACTGCC
AGTACCGCTC TCGGCTTAAT TAACCGCTTC CCCGTGAAGG ATATGGAAGA TGAAGCCTGA
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| Protein sequence | MSEAEWVTIE GSPSILDVLV SQTETAFSLD VATLFPFELD DFQKEAIAAL DQGRSVVVCA
PTGSGKTLIG EYAIYRALAR GKRVFYTTPL KALSNQKLRD FREQFGSDRV GLLTGDTSIA
RDAPIVVMTT EIFRNMLYGT RIGEVGTSMI DVETVVLDEC HYMNDQQRGT VWEESIIYCP
PTVQLVALSA TVANGGQLTD WIDQVHGPTD LIYSDYRPIP LAFSFCGNNG LFPLLDETGK
SIHPSFKVRR KTKGAKHDRK GREIPEIPSL GFVVGQLQQR QMLPAIYFIF SRRGCDKAVR
DLGPISLVNA DEAARLKQRV NAFLAQSPEA ARSGHVEPLL RGIASHHAGV LPAWKGLIEE
LFQEGLVKVV FATETLAAGI NMPARTTVIA SLSKRTDSGH RLLLPSEFLQ MSGRAGRRGL
DDQGYVVTVQ SRFEGSQEAA HLATVGPDPL VSQFTPSYGM VLNLLQKHSL EEAKELVERS
FGRYLASLSL KPEQEKIAAI AAERDRLQAE LADVDFATLA EYDKLYGRLK EEKRLLKILH
EQAEEVVHRD LAMALSFAVA GTILSLKGRH VPVPEPLPAV LIAKIPGSGQ FPWLLCLGMD
NRWVVATTSD VVGLHAELAR ISAVDFLHPP AQLHKPGQHH KGDEATAWIA EKLWELSQRH
HLALAGSDLA EEVVQQAEQV EAVNTLLINH PVHCWQNRKR LHKRQQQLQA LEDEIGDRRA
RLEKLGQRHW QEFLSLMSIL ENFSCLEDLK PTEMGQNVAA LRGDNELWLG LVLMSGELDG
LTPAEFAAAS EALVTEVSRP DLWTRFDVPP AVEDALMGVR GLRRQLQQQQ SRRNVFTPIW
LELDLTGLVK AWAEGMEWNE LCAATSLDEG DIVRVLRRTI DFLAQIPHMP YLQGGVKNTA
STALGLINRF PVKDMEDEA
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