Gene Synpcc7942_1302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1302 
Symbol 
ID3775938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1330250 
End bp1330726 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content52% 
IMG OID637799732 
Producthypothetical protein 
Protein accessionYP_400319 
Protein GI81300111 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTATC AAAAAATCTT GGCAGCGATT GATCTTTCGG CTGGCAAAAG TTCGATTTTT 
AAGAAAGCGC TGACGCTAGC CCAACAAAAT CAGGCTCAAC TGGTTTTACT GCACTGCTCG
CCATTACCTC CGGTCTACAG CAGCAGCTAC ATCAACTTCC TAAACTCGCC ATCTGACTGG
ACTGTCGATC TCAGCTTGGC AGAAGCCAGC CAACGGCAAG ATGCTGAGTT GGCCCGCCAG
CAACTGCAAG ATCTGCGACA ACAAGCAACC GCAGTTAATA TCGAAGCCAT TCCCTTGCTT
CGCTTTATCG ATCCCAGCCG AGGCATTTGC GATGCCGTCA AAGACTTGGG CGTAGACCTC
GTTGTTGTGG GTCGGCGTGG TCTGAGCGGG ATTTCAGAAA TCTTGATGGG CAGCGTCAGT
AGCTATGTCG TCCACCACGT CAGCTGCGAT GTACTGATCG TTCAAGCCGA CCAGTAG
 
Protein sequence
MSYQKILAAI DLSAGKSSIF KKALTLAQQN QAQLVLLHCS PLPPVYSSSY INFLNSPSDW 
TVDLSLAEAS QRQDAELARQ QLQDLRQQAT AVNIEAIPLL RFIDPSRGIC DAVKDLGVDL
VVVGRRGLSG ISEILMGSVS SYVVHHVSCD VLIVQADQ