Gene Synpcc7942_0435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0435 
Symbol 
ID3773380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp426075 
End bp426830 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content60% 
IMG OID637798841 
Producthypothetical protein 
Protein accessionYP_399454 
Protein GI81299246 
COG category[S] Function unknown 
COG ID[COG3689] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.267634 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCTTC GGCGTCTGAC TTCTGTTGCG CTCTTGCCTT GGCTAGACTG CCTGAGCCTG 
GCGGCTTGGG GGGGACTGCT GCTGCTCTAT TGGCTGCGGG GCGACCTCAA TCTTTTAATT
CACCCGGCCT ACCAAGCTCT GACAGTGTTT ACAGCGATCG CATTTTTGGG GATGGCGATC
GCGCGGGGCT GGCAACTGAA ATCCCAGCGC CCTTTCCCGC AGGCGTCCCA TTCGGCCCTG
TTGCCCCGTC GGCTGAGTAT TGGTCTGCTG TTGCTGGTGG CGGTCGCCGG CTTTATCATT
CCGCCGCGGG TGTTTGCCAA TGATCTGGCA CGCGATCGCG ACCTCGCAGA CTTAACGGGC
TATAGCCGCA GTCGACCGCA GGCGTTTCGC AGCAGCCAGC GGCCGGAGGA ACGGACAATT
ACCGACTGGG TGCGCACCCT CAATGTCTAT CCAGAGCCGT CGGCCTATGT CGGCCAGCGG
GTGAACGTGA CTGGCTTTGC CATGCATCCA CCTGAACTGC CGAGTAACTA TCTTTTGGTT
GCTCGCTTTA CCCTGACTTG TTGTGCCGCC GATGCCTATC CCTTGGGACT TCCTGTGCGG
CTTCCCGCAG GCGATCGCCA GTCCTATCCC GTCGATCAAT GGTTGTCGGT GCAGGGCGTG
ATGCAAGCGG AGACTGTAGC GGGCAAAAAG CAAGTCGTGA TTGCGGCCCG GCAAGTCCAA
CCGATCAGCC CACCCAGTAA TCCCTACGAC AGCTAA
 
Protein sequence
MVLRRLTSVA LLPWLDCLSL AAWGGLLLLY WLRGDLNLLI HPAYQALTVF TAIAFLGMAI 
ARGWQLKSQR PFPQASHSAL LPRRLSIGLL LLVAVAGFII PPRVFANDLA RDRDLADLTG
YSRSRPQAFR SSQRPEERTI TDWVRTLNVY PEPSAYVGQR VNVTGFAMHP PELPSNYLLV
ARFTLTCCAA DAYPLGLPVR LPAGDRQSYP VDQWLSVQGV MQAETVAGKK QVVIAARQVQ
PISPPSNPYD S