Gene Synpcc7942_0350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0350 
Symbol 
ID3774871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp342793 
End bp343671 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content58% 
IMG OID637798756 
ProductATPase 
Protein accessionYP_399369 
Protein GI81299161 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCTGGT GCACAGGGGA GTCAGCCAGG TGGCCGCGCA TCGCTGCGAC CTTCCCTAAA 
ATATGGGCAA TCTTTGCCCC TACGCTGATG TCGAGCCGTG ATGCTGAGCC GCTAGTCGAA
CTGCGCAATG TCCGTAAGGC CTTTGGCAAG CAAATGGTGC TAGACGGGGT AGACCTCAGC
ATCTATCCCG GAGAGGCGAT CGGCATTCTT GGCCCCTCGG GGACGGGTAA GTCAACCATT
CTGCGCATTA TTAGCGGCTT GATCTTGCCG GACTCGGGAG AAGTCTGGGT AGCAGGTCAG
CAGCGTACCG CTCCGATTAC CGAACAGCCC AATCCCTTCC CGATCAACTT GGTCTTTCAG
CAAGCGGCGC TGTTTGATTC GTTGACCGTG GGTGAAAATG TGGGCTTTTA TCTTTACCAG
CACACCCGCC TCAGCCCTGC TGAAATTGAG CACTACGTTG CTTGCAGCCT CGACAGTGTA
GGGCTGCCCA ACATTGCTCA TCTGATGCCA TCTGAACTGT CGGGAGGCAT GCGCAAACGC
GTTAGTTTTG CCCGAGCGAT CATCAGTACC CTGCTGGAAG AGTCCGGTGG GCGATCGCTG
ATTCTCTACG ATGAACCGAC GGCAGGCCTC GACCCGATCG CCTCCACTGT GGTCGAAGAC
CTGATGCGCA GTCTCAAGCA GCAGCAACCC CAGGCCTCCT ACGTGGTGGT CACGCACCAA
GAAAGCACGA CTCGTCGCAC CGCCGATCGC CTGATTCTGC TCTATCGCGG CCAAGTCTGT
TGGCAGGGAA CTGCCGCAGC GCTGGACGAG ACTGATAACA TCTACGTGCG TCAATTCCTG
AGTGGTCGCA TCGACGGGCC CATTCAAGTC GCGACCTAG
 
Protein sequence
MGWCTGESAR WPRIAATFPK IWAIFAPTLM SSRDAEPLVE LRNVRKAFGK QMVLDGVDLS 
IYPGEAIGIL GPSGTGKSTI LRIISGLILP DSGEVWVAGQ QRTAPITEQP NPFPINLVFQ
QAALFDSLTV GENVGFYLYQ HTRLSPAEIE HYVACSLDSV GLPNIAHLMP SELSGGMRKR
VSFARAIIST LLEESGGRSL ILYDEPTAGL DPIASTVVED LMRSLKQQQP QASYVVVTHQ
ESTTRRTADR LILLYRGQVC WQGTAAALDE TDNIYVRQFL SGRIDGPIQV AT