Gene Syncc9902_2045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_2045 
Symbol 
ID3743005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1954449 
End bp1955276 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content54% 
IMG OID637772242 
Productphotosystem II manganese-stabilizing polypeptide 
Protein accessionYP_378046 
Protein GI78185612 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCATTC GTTCCCTGCT GGCCGTTGTG CTGGCGTTAT GCCTCACTTT CTTCACTACG 
GCTTGCAGCG GTGGCACTGA TGCAAACCGT GGTGAGTCCA ACGTCACCTA TGACGACATT
CGCAACACTG GTAAAGCCAA TGATTGCCCC ACGATCGGCG ACGCTGCCCG TGGCTCCATC
CCTCTAACCG CTGGTCAGAA ATACGAACTT CGCGGGATCT GCATGCATCC CGTTCAGGTT
TATGCCAAGG AAGAGCCTAA AAATGCTCGC CAGCAGGCTG AATTCGTTGA GGGCAAAATT
CTCACCCGTT ACACCTCCAG CCTTGATGAG GTGTATGGCG ATCTGACGGT GACTGAATCT
GGCCTTCAGT TTCAGGAAAA AGGTGGGATC GACTTTCAGC CCATCACGGT GCTTGTTCCC
GGCGGTGAAG AATTCCCGTT CTCGTTCTCT AGCAAGTCTT TGAAAGCCCT GGCTGATGGT
GCCGCAATCA CCACCAGCAC CGATTTCGAA GGCACTTATC GCACCCCGAG CTATCGCACG
AGCAACTTCA TCGATCCCAA GGGACGTGCT CTCACCACTG GTGTTCAGTA CGCCCAAGGA
CTGATTGCTC TTGGCGGAGA TGAGAAAGAT CTCGAGAAAG ACAACAACAA GCGTTACATC
GATGGGATCG GCACGATGAG CATGTCGATC ACCAAGGTGG ATCCCGAAAC CGGTGAGTTT
GCAGGTGTCT TCACTGCGAT CCAGCCCTCC GACTCCGACA TGGGTGGTCG TGAAGTGGTT
GATATCAAAG TGGTTGGCGA ACTTTATGGC CGTTTAGAAG AGGCTTGA
 
Protein sequence
MRIRSLLAVV LALCLTFFTT ACSGGTDANR GESNVTYDDI RNTGKANDCP TIGDAARGSI 
PLTAGQKYEL RGICMHPVQV YAKEEPKNAR QQAEFVEGKI LTRYTSSLDE VYGDLTVTES
GLQFQEKGGI DFQPITVLVP GGEEFPFSFS SKSLKALADG AAITTSTDFE GTYRTPSYRT
SNFIDPKGRA LTTGVQYAQG LIALGGDEKD LEKDNNKRYI DGIGTMSMSI TKVDPETGEF
AGVFTAIQPS DSDMGGREVV DIKVVGELYG RLEEA