Gene Syncc9902_1264 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1264 
Symbol 
ID3743283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1228729 
End bp1229253 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content55% 
IMG OID637771444 
Productphycobilisome core component-allophycocyanin beta-18 subunit 
Protein accessionYP_377272 
Protein GI78184837 
COG category 
COG ID 
TIGRFAM ID[TIGR01337] allophycocyanin, beta subunit 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGATG CCATTGGTGG TCTGATCGGT CGCTACGACC AGCTGGGCCG CTATTTCGAC 
AGATCGGCGA TCGACAGTAT TGAGTCTTAC CTCGATGAAT CTGAGCTGCG TATCAGGGCT
GTTGAGTTGA TCAATGCCGA CGCGGCTGAA ATTGTGCGCG AAGCCAGCCA GCGCCTTTTT
CAAGATGAAC CAGACCTGCT TTTGCCCGGC GGGAACGCCT ACACAACGCG GCGTCTTGCG
GCGTGTTTGC GGGATATGGA TTACTTCTTG CGGTATGCGA GCTACGCGCT CGTGGCCGGA
GACAGCACGA TCCTCAACGA ACGTGTTCTG AATGGATTGG ACGATACCTA TAAAAGTCTT
GGTGTTCCGA CCGGTCCAAC GGTTCGGAGC ATTGTTTTGC TGGGCGAAGT GGTTGCCGAG
AGCCTTCTCC AACAGGGTGT TCCTGCCGAC AAGCTCGGTT CTGTGATGCA ACCCTTTGAT
CATTTAGCCC GTGGGTTGGG GGAAACCAAC GTTCGTCAGC GCTGA
 
Protein sequence
MRDAIGGLIG RYDQLGRYFD RSAIDSIESY LDESELRIRA VELINADAAE IVREASQRLF 
QDEPDLLLPG GNAYTTRRLA ACLRDMDYFL RYASYALVAG DSTILNERVL NGLDDTYKSL
GVPTGPTVRS IVLLGEVVAE SLLQQGVPAD KLGSVMQPFD HLARGLGETN VRQR