Gene Syncc9902_1133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1133 
Symbol 
ID3743269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1098745 
End bp1099239 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content52% 
IMG OID637771313 
Productallophycocyanin alpha-B chain 
Protein accessionYP_377141 
Protein GI78184706 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.562521 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGTTG TCCGGGATCT CATCCTTCAA GCCGATGATG ATCTGCGGTA CCCCACCAGC 
GGCGAACTCC GTTCGATGGT GGAATTTCTT GATCAAGGCG CGATGCGCGT TTCGGTCGTC
AAAGTCTTGA CCGATAACGA AAAGAAGATT GTCGACGAAT CGGCGAAACA ACTTTTTAGT
CGAAAGCCAG AATATGTAGC CCCTGGTGGG AATTCCTACG GCCAGCGGCA ACGCGCTCAA
TGCCTTCGTG ATTACAGCTG GTACCTACGG CTTGTGACCT ATGGCGTTCT CGCGGGAAGC
ACGGAGATGA TTCAAGACAT TGGATTGGTT GGGGCACGGG AGATGTACAA CAGCCTTGGA
GTTCCAATGC CTGGCATGGT CGAAGCGATG AAAACGATGA AAGATGCTTC GCTGGCTTTG
CTCTCCGACC AACAAGCCAA ACTCTCCTCC CCTTATTTCG ACTTTTTGAT CCAGGGGATG
CAGACATCCA CTTGA
 
Protein sequence
MSVVRDLILQ ADDDLRYPTS GELRSMVEFL DQGAMRVSVV KVLTDNEKKI VDESAKQLFS 
RKPEYVAPGG NSYGQRQRAQ CLRDYSWYLR LVTYGVLAGS TEMIQDIGLV GAREMYNSLG
VPMPGMVEAM KTMKDASLAL LSDQQAKLSS PYFDFLIQGM QTST