Gene Syncc9902_1048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1048 
Symbol 
ID3743203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1012694 
End bp1013503 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content55% 
IMG OID637771222 
Producthypothetical protein 
Protein accessionYP_377056 
Protein GI78184621 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0668603 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAACAC ATCGCATTCG AATCCTGTGG GGCGCCCTTT TGGCCATGGT CATCGGCCTT 
TGGGGGGCAG CATCACCTGC GCTGGCTTAC GACAACCCTG AACTCCTTCC CGACCACCCC
ACGCCGGTGA TCGATCTCGC AAGGGTTTTC AGCGAAACCC AACGAGAACG GTTGGAGGAA
TCACTTGGAG AGGTGGAAGA ACGAACAGGA TGGAAATTGC GGGTTCTCAC CCAGTACGAA
CGAACACCAG GATTAGCGAT CCGAGAATTC TGGGGACTCG ACGAACGAAG CCTGTTGCTT
GTAGCAGACC CCAGAGGAGG CAATCTGCTC AACTTCAACG TCGGCGATGC GTACTTCGCA
ATGATGCCGA GAACCTATTG GGTCGAACTA CAGACCAGAT TCGGCAATCA GTATTACGTC
AAAGATCACG GTGAAGATGG CGCCGTATTG GATGCATTGG GCGCCGTCGA AATCTGCTTG
GATCGCGGCG GATGTCAGGT CGTTCCTGGC TTGCCCTTGG AACAGTGGCT TTGGACGCTC
ACCACATCGG TTTTAGGAGG GTTGATTGCA GGTTTTGCCG CCTATCCGCG TAAGGAAGGA
GAAACGGTCG CTTGGGCCTG GCTACTGCTG CTCTCACCGC TGTGGGGAAT GTTGTTTGGC
ATCTTCGGCA TTGCACCAGT GATCACACGC ACCTCGGAAT GGTTGCCACT CATTCGAAAC
ACGTTTGGGT TCTTAGCTGG GGGAGTCGCC GCTTACTTCA TTGCCCAAGT CACGATGGGA
CGACGCCTTC AAAGTGAAAC TGACGAGTAA
 
Protein sequence
MGTHRIRILW GALLAMVIGL WGAASPALAY DNPELLPDHP TPVIDLARVF SETQRERLEE 
SLGEVEERTG WKLRVLTQYE RTPGLAIREF WGLDERSLLL VADPRGGNLL NFNVGDAYFA
MMPRTYWVEL QTRFGNQYYV KDHGEDGAVL DALGAVEICL DRGGCQVVPG LPLEQWLWTL
TTSVLGGLIA GFAAYPRKEG ETVAWAWLLL LSPLWGMLFG IFGIAPVITR TSEWLPLIRN
TFGFLAGGVA AYFIAQVTMG RRLQSETDE