Gene Syncc9902_0935 details

Gene Information

• Locus tag: Syncc9902_0935
• Symbol: thrS
• ID: 3743034
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Synechococcus sp. CC9902
• Kingdom: Bacteria
• Replicon accession: NC_007513
• Strand: -
• Start bp: 926052
• End bp: 927887
• Gene Length: 1836 bp
• Protein Length: 611 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 637771109
• Product: threonyl-tRNA synthetase
• Protein accession: YP_376945
• Protein GI: 78184510
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0441] Threonyl-tRNA synthetase
• TIGRFAM ID: [TIGR00418] threonyl-tRNA synthetase

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0867221
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGGGCC TTGTTCCGGT TCCGGTGAGC AGCGCTGCAG CAACCACATC CGCCCCACTC 
GCGCCCGTGG TTCTGCCGAA GACCAGCGAG AGCGAGCAGC TTCTCAAAAT TCGTCACTCC 
ATGAGCCATG TGATGGCGAT GGCAGTGCAG AAGCTCTTTC CCAATGCTCA GGTCACCATT 
GGTCCTTGGA CGGAGACTGG CTTCTATTAC GACTTCGATA ACCCCGAACC CTTTACGGAA 
GACGATCTGA AGGCCATCAA GAAGGAGATG GGCAAAATCA TCGGCCGCAA GCTGCCCCTC 
GAGCGGATCG AGGTGAGCAG AGATGAGGCA GAGACACGGA TCAAAGCCCA AAACGAGCCT 
TACAAACTCG AAATTTTGGA GCGGCTCCAA GAGCCGATCA CCCTCTACAC ACTTGGGGAT 
CAATGGTGGG ATCTTTGTGC GGGCCCCCAT GTTGAAAACA CCAAAGAACT TCACCCCAAG 
GCGTTCGAAC TCGAAAGTGT CGCCGGTGCT TACTGGCGTG GCGATGAAAC AAAAGCGCAG 
CTTCAGCGCA TCTACGGCAC AGCCTGGGAG ACGCCCGAAC AACTTGCAGA ACACAAGCGC 
CGCAAAGTAG AAGCGCTTCG CCGTGATCAT CGGCGGCTCG GCAAAGACCT CGAGTTGTTC 
TCCATCGAAG ACGAAGCTGG AGCAGGGCTG GTGTTCTGGC ATCCAAGGGG TGCACGCATG 
CGCCTACTCA TCGAAGATTT TTGGCGGCAG GCCCATTTCG AGGGCGGCTA TGAATTGCTG 
TACACACCAC ATGTGGCAGA CATCAGCCTC TGGAAAACAT CAGGCCACCT CGACTTTTAT 
GCCGAAAGCA TGTTCGGGCC GATGCAGGTG GATGAACGGG AATATCAGCT GAAGCCGATG 
AACTGTCCGT TTCATGTGCT CACCTATGCC AGCAAATTAA GGAGCTACCG CGAACTGCCG 
ATTCGTTGGG CTGAGTTGGG GACGGTCTAC CGCTACGAAC GTCCTGGGGT GATGCATGGC 
CTGATGCGGG TTCGAGGGTT TACGCAAGAC GATGCCCACG TGTTTTGTTT GCCCGATCAA 
ATCAGCGATG AGATTCTGCG AATCCTTGAT CTCACCGAAC GCATCCTCTC CACTTTTGAT 
TTCAATCACT ACGAAATCAA CTTGTCCACC CGACCAGAAA AATCAATTGG TAGCGAAGCC 
GTTTGGGAAC TAGCCACGAA GGGGCTCACC GAAGCACTCG AGCGCAAAGG TTGGAACTTC 
AAAATTGATG AAGGTGGCGG TGCTTTTTAT GGCCCCAAGA TTGATTTAAA AATCGAGGAT 
GCCATCGGCC GCATGTGGCA GTGCTCCACC ATCCAATTGG ACTTCAACCT GCCCGAGCGT 
TTCGGCTTGG ATTACGTGGC CGCTGATGGC TCAAAACAGC AGCCGATCAT GATTCACAGG 
GCGATCTTTG GATCGCTGGA ACGGTTTTTC GGAATCATGA CCGAAAACTA TGCCGGTGAT 
TTTCCCTTCT GGCTTGCCCC CGAGCAGATC CGACTTTTAC CCGTCACCGA TGACGTTCAG 
CCCTATGCCG AGCAGGTTCT CAACCAGCTC AAAACAGCTG GAATCCGCGC CACAATCGAT 
CAAAGCGGAG ATCGCCTTGG CAAGATTATC CGCACAGGGG AACAGATGAA GATTCCCGTT 
TTGGCAGTGA TCGGTGCCAA AGAAGCCGAA CAAAACGCCA TCAGCCTGCG CAGCCGCCGT 
GATGGAGATC TTGGCGTCAC GTCCGTGGAT GCATTACTCA AAGCCGCACA GCGCGCTAAC 
GCGGAACGTC AACCAGGCCT CGGACTCAAC CCATGA 

 

Protein sequence

MAGLVPVPVS SAAATTSAPL APVVLPKTSE SEQLLKIRHS MSHVMAMAVQ KLFPNAQVTI 
GPWTETGFYY DFDNPEPFTE DDLKAIKKEM GKIIGRKLPL ERIEVSRDEA ETRIKAQNEP 
YKLEILERLQ EPITLYTLGD QWWDLCAGPH VENTKELHPK AFELESVAGA YWRGDETKAQ 
LQRIYGTAWE TPEQLAEHKR RKVEALRRDH RRLGKDLELF SIEDEAGAGL VFWHPRGARM 
RLLIEDFWRQ AHFEGGYELL YTPHVADISL WKTSGHLDFY AESMFGPMQV DEREYQLKPM 
NCPFHVLTYA SKLRSYRELP IRWAELGTVY RYERPGVMHG LMRVRGFTQD DAHVFCLPDQ 
ISDEILRILD LTERILSTFD FNHYEINLST RPEKSIGSEA VWELATKGLT EALERKGWNF 
KIDEGGGAFY GPKIDLKIED AIGRMWQCST IQLDFNLPER FGLDYVAADG SKQQPIMIHR 
AIFGSLERFF GIMTENYAGD FPFWLAPEQI RLLPVTDDVQ PYAEQVLNQL KTAGIRATID 
QSGDRLGKII RTGEQMKIPV LAVIGAKEAE QNAISLRSRR DGDLGVTSVD ALLKAAQRAN 
AERQPGLGLN P