| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0640 |
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| Symbol | |
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| ID | 3743462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | + |
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| Start bp | 653533 |
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| End bp | 655092 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637770812 |
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| Product | lipopolysaccharide biosynthesis protein-like |
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| Protein accession | YP_376652 |
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| Protein GI | 78184217 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3754] Lipopolysaccharide biosynthesis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.7378 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCGTT GGTTTTGTCG CTTAGATCCG GCTTTTTATC CTGCTTGGCA GAGGGGTGAT
CTCGAGGCGC AGGCGAGATC TTTTGCCATC CAGGGTTGGC TCCTTTCCAT TGATGTGGAT
GGCCAAGGCA CGTCTAGTTC TTTTCTGAAT CCTCCTGCTG CACCCGATCT CCCCTGGGCA
TGGGAATTAA ATTGCAGCGA TCCGCTCTCT CCTCAAGCGG AGCGAAATTT GCTGGCATCG
CTTAAAGAGG CTTGGTGCTC AGAGCATGTT CTGCATCTTT TAGGCCGGCC CGTCATCGTA
TTGCGTGGTT TGAAAAATTT GAGCTCATTA AAATTTGCTC TTCAACGCTT CCGCAAATTG
CATGATCAAT TGTTGATTCT CAGTAGTGAT CTTCGACCCA TCAGTGGAAT TGAAGAGAAT
GGTCTGGATG TTGATGGGTG GTTGGACTCA TCGACCGATC AAATGATTTA TATCCGAAAT
TTAAAGCTGG CTCATCATCG TTTGGCAGGC TCAGGCTTAG AAGTTCCTGG GGTTTGGGCG
ATGGATCAAG ACCTTGAAAA GGTTTCGAGT GATTCGCCGA ATGAGCTTTA TCGGGAATGG
CTCGAGCAAG CATCGGCCTG GAGTGAGTTG GCGAATGATG GGGCGATTGA TGCCCCTGTA
TGCATACAAG ATTGGTCGGG ACACTGTCGC TTGATGATGC CTTCATCTTT GAAGGAGAAA
AGTGTTGAGC CTGAGCGTTT GAATGTGACG CAAATCCCAT CTACTGATGA ACGTAGTTGG
GGAGAGTCAT CTCCAGGTCA TCTGGCCCTC ATGATTCATG GTTTTTATCC CGATGTTCTA
GACGACATTC TTTTGAAATT ACCGAGCTTT TGTGCGGGAA TGGTTGGCAC TCAGCTTGAT
CTTTATGTCA GCACTTCAAT GGATCAGATA GATCAGGTTG AAAAGAAGCT TCGTGATCTC
GATTTTGCGT GTGTTCGCTT GTTTGGTGTG GAGAATCGTG GGCGAGATGT GGCGCCATTT
TTGCTGCATT TGCTGCCGGC CGTGGCTGCC GCTGGTCATC ATTTTTTTGT GAAGCTACAT
ACTAAAAAGT CGCTTCAGTT TGGTATCGAC GGGCTCGATA AGTGGTCGCG ACATTTGATT
GAGTCGCTGT TGAGTGCTGC TGGACTGGAG GCGATTAGAT ATCAATTCTT GGATGATGAG
GATTTGGGAT GTTTGTGCCC ATCAGGAACC CTTCTGCCCC TGGCAATTGC TTTGTTTAAA
AATAAGACTC ACTTGCATCA TTTATTGAGT CATTCTGAGA TCAATGGGCG CTGGGCACTG
ATGCAAACAT TTGTGGCTGG CAGCATGTTT GCTGGCCGCG TTGAGGCTTT CCGCTCATTG
CTCGATCAAG GCTTTTCGTT GGACGACTTT GAACTTGAAG GTGGCCAGTT TGATGGAACA
TTTGCCCATG CTCTTGAACG TTTGATCTCG CTGGAGGTGA AACGTTCGGG TTGGCAGATT
AAGGAGATGT CTGGCAGTCC CGAGGCGGTT CCAGGTTTTG GTTACGGCTT GGTGGATTGA
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| Protein sequence | MARWFCRLDP AFYPAWQRGD LEAQARSFAI QGWLLSIDVD GQGTSSSFLN PPAAPDLPWA
WELNCSDPLS PQAERNLLAS LKEAWCSEHV LHLLGRPVIV LRGLKNLSSL KFALQRFRKL
HDQLLILSSD LRPISGIEEN GLDVDGWLDS STDQMIYIRN LKLAHHRLAG SGLEVPGVWA
MDQDLEKVSS DSPNELYREW LEQASAWSEL ANDGAIDAPV CIQDWSGHCR LMMPSSLKEK
SVEPERLNVT QIPSTDERSW GESSPGHLAL MIHGFYPDVL DDILLKLPSF CAGMVGTQLD
LYVSTSMDQI DQVEKKLRDL DFACVRLFGV ENRGRDVAPF LLHLLPAVAA AGHHFFVKLH
TKKSLQFGID GLDKWSRHLI ESLLSAAGLE AIRYQFLDDE DLGCLCPSGT LLPLAIALFK
NKTHLHHLLS HSEINGRWAL MQTFVAGSMF AGRVEAFRSL LDQGFSLDDF ELEGGQFDGT
FAHALERLIS LEVKRSGWQI KEMSGSPEAV PGFGYGLVD
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