18 homologs were found in PanDaTox collection
for query gene Syncc9902_0640 on replicon NC_007513
Organism: Synechococcus sp. CC9902



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007513  Syncc9902_0640  lipopolysaccharide biosynthesis protein-like  100 
 
 
519 aa  1054    Synechococcus sp. CC9902  Bacteria  normal  0.7378  n/a   
 
 
-
 
NC_010717  PXO_03177  hypothetical protein  34.94 
 
 
695 aa  116  7.999999999999999e-25  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0713638  n/a   
 
 
-
 
NC_011071  Smal_0519  hypothetical protein  29.57 
 
 
686 aa  102  2e-20  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.414817  normal  0.208211 
 
 
-
 
NC_009007  RSP_3918  hypothetical protein  31.45 
 
 
751 aa  97.4  5e-19  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009040  Rsph17029_4087  lipopolysaccharide biosynthesis protein-like  31.1 
 
 
751 aa  96.7  8e-19  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.885758  normal  0.378221 
 
 
-
 
NC_010172  Mext_3694  lipopolysaccharide biosynthesis protein-like protein  31.65 
 
 
916 aa  95.1  3e-18  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_007513  Syncc9902_0633  lipopolysaccharide biosynthesis protein-like  28.75 
 
 
1161 aa  89.4  2e-16  Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_007516  Syncc9605_2036  lipopolysaccharide biosynthesis protein-like  26.83 
 
 
1162 aa  85.5  0.000000000000002  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_2007  hypothetical protein  30.17 
 
 
513 aa  85.1  0.000000000000003  Agrobacterium vitis S4  Bacteria  normal  0.836412  n/a   
 
 
-
 
NC_011894  Mnod_4336  Lipopolysaccharide biosynthesis protein-like protein  27.78 
 
 
1366 aa  81.6  0.00000000000003  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.350964  n/a   
 
 
-
 
NC_009379  Pnuc_0320  methyltransferase type 11  30.42 
 
 
1082 aa  78.6  0.0000000000003  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4197  glycosyl transferase, group 1  29.44 
 
 
846 aa  78.6  0.0000000000003  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007614  Nmul_A2403  glycosyl transferase, group 1  30.24 
 
 
828 aa  72.8  0.00000000001  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_4195  Rhamnan synthesis F  26.18 
 
 
631 aa  67.4  0.0000000006  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_4001  glycosyl transferase family protein  29.2 
 
 
1301 aa  64.7  0.000000004  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.248579 
 
 
-
 
NC_010816  BLD_1572  lipopolysaccharide biosynthesis protein  26.23 
 
 
666 aa  63.5  0.000000009  Bifidobacterium longum DJO10A  Bacteria  normal  0.211326  n/a   
 
 
-
 
NC_007641  Rru_B0007  glycosyl transferase, group 1  25.32 
 
 
1236 aa  59.3  0.0000002  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007488  RSP_3988  glycosyltransferase  31.93 
 
 
793 aa  43.9  0.007  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
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