| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0214 |
|---|
| Symbol | |
|---|
| ID | 3743024 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | - |
|---|
| Start bp | 226994 |
|---|
| End bp | 229021 |
|---|
| Gene Length | 2028 bp |
|---|
| Protein Length | 675 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637770383 |
|---|
| Product | selenide,water dikinase |
|---|
| Protein accession | YP_376232 |
|---|
| Protein GI | 78183798 |
|---|
| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0709] Selenophosphate synthase
[COG1252] NADH dehydrogenase, FAD-containing subunit |
|---|
| TIGRFAM ID | [TIGR00476] selenium donor protein
[TIGR03169] pyridine nucleotide-disulfide oxidoreductase family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCAT CGGGATCTCT CCTCCTCGCT GGAGGAGGGC ACAGCCATGC TCTTCTGCTC
AAACGCTGGG CAATGACGCC GAGGTTGCGG CCCAAGCGCA GCATTGTGCT GATCAATCGG
CATCCGACTG CCCTGTATTC CGGCATGGTG CCCGGCTTGA TCGCCGGGAT CTATCGGCGG
GAGGAGCTGA GTATCAATCT TCCGCACCTC TGCGATCGAG CGGGGGTGGC CTTTGTGCAG
GCCGAAATCA GTGGTATTGA TTCCCAACGC CAAGATCTCC TGCTCCACCA GCGACCAGCC
CTGAGCTTTG GTGTGCTCAG CCTTGATGTT GGAGCGGTGA CGCGAAACCT TGAACACCTT
TCTGGTGTTC CAGTCAAGCC GTTGGAGGAA GCCCTTCAGT TTTTATCTCA ACAAGACCCT
GAAGATCCAC AACCCTTTCG CATCGTGGGT GCGGGACCCG CCGGAATCGA AGTGGCCCTG
GCACTGCGAC GACGCTGGCC CCGTCGCCCA CTGGAATTAC AGATCCGTGC AGGCCAACTC
AACGCCACCA CCAAGTCGAT CCTCAGTCGT GCTCACATTC AGTGCGTCAC CGACGCCAAT
GCCCACGCAT CCCTCCTCTG CACGGGAAGT CGCGCACCGT CTTGGCTGGC CAACAGTGGA
TTTGCGGTGG ACCACGACGG ACGGGTTCTA ACCAACTCTT TCCTCCAGCT CGAGGGATAT
TCCCATCTGT TTGCGAGCGG CGATTGCGCC GTGATGGAGG CCCAACCGCG GCCCGCCTCA
GGGGTGTGGG CTGTGCGTTC CGCCGTGCCC TTGGCCCAGA ACCTTGAGGC GATCTGCAAC
GGCCAAAGCC TGAAGCGATG GACACCACAA CGCGATGCCC TGCAGTTAAT TGGGACCGGG
AACAACGCGG CCTGGATGCT GCGAGGCCAT GCTCATACCG GAGCATTCAG GCTGCTCTGG
AGCCTGAAAC AACGAATTGA TCATTCGTTC ATGGCCGGTT TCAGCCAACT CGCCCCCATG
GGAGCAGCCG AACCAATGGC CTGCCGTGGC TGTGCCGCCA AGCTTCCCGC GCGCCCCCTC
AACGCAGCGT TGTCGCAGGC GGGACTCAAA ACCCAAGCGG AAGATGCCGC CAACCTCGGC
GGAACGCCAG CACTACTGCA AAGCGTTGAT GGCTTTCCTG CTCTCGTGAG TGATCCCTGG
CTGAATGGTC GGCTCACCAC CTTGCACGCC TGCTCTGATC TCTGGGCTTG TGGGGCCAAG
GTCACCAGTG CGATGGCCGT CGTCACCCTG CCGTCCATCC ACTCCACCGA ACAGCAAGAA
CTTCTCCATC AAACTTTGGC TGGGGTTCAG TCGGTGTTGA TCGAACAGGG AGCGTCACTG
ATCGGGGGTC ACACCTTGGA GTCGCGCAGT CCCACGCCTT CCCCGACCAC CCTGGGATTG
CAAGTCGCCC TGACCGTGAA TGGCCAAACT TCAAAACCCT GGCCCAAGGG TGGTATTCAG
CCTGGAGATG CGCTCCTGCT GAGCCGTCCC CTTGGCGTCG GCGTGCTCTT CGCTGCAGCT
ATGGCAGGGG TCGCCAAGCC CAAGGATGTC GAAGCGGCCC TGCGCACGAT GAACCAAAGC
CAACATCGCT TGGTGGATGG GTTGCAGAAG CATGGCGCCG ACATTCATGC CTGTACTGAC
GTGACCGGCT TTGGGTTACT GGGACATCTC GGAGAGATGC TGCAGGGAAG CGAGCCCATC
ACCATCCAAC TGTGGCCCAA TCGAATTCAA GCCCATCCAG GTGCACTGGA CCTACTCGAC
CAAGGGATAG CCAGCAGCCT GGCCCCCGCA AATCGTGATG CCTGGAGCTG GCTTGAGGGG
CCAGTTCAAC TCAACGCGTC ACCATCCCAG GCCTGTCTGG AACTACTGGT GGACCCACAA
ACCTGTGGAC CACTCCTCTT GGCCTGCACC GCAGCAGCTG CCGAATGTCT TATGGCACAG
GATTCAGCTT GGATTCAAGT TGGCATTGCA GGATCCGGCC ATGGCTAA
|
|---|
| Protein sequence | MTPSGSLLLA GGGHSHALLL KRWAMTPRLR PKRSIVLINR HPTALYSGMV PGLIAGIYRR
EELSINLPHL CDRAGVAFVQ AEISGIDSQR QDLLLHQRPA LSFGVLSLDV GAVTRNLEHL
SGVPVKPLEE ALQFLSQQDP EDPQPFRIVG AGPAGIEVAL ALRRRWPRRP LELQIRAGQL
NATTKSILSR AHIQCVTDAN AHASLLCTGS RAPSWLANSG FAVDHDGRVL TNSFLQLEGY
SHLFASGDCA VMEAQPRPAS GVWAVRSAVP LAQNLEAICN GQSLKRWTPQ RDALQLIGTG
NNAAWMLRGH AHTGAFRLLW SLKQRIDHSF MAGFSQLAPM GAAEPMACRG CAAKLPARPL
NAALSQAGLK TQAEDAANLG GTPALLQSVD GFPALVSDPW LNGRLTTLHA CSDLWACGAK
VTSAMAVVTL PSIHSTEQQE LLHQTLAGVQ SVLIEQGASL IGGHTLESRS PTPSPTTLGL
QVALTVNGQT SKPWPKGGIQ PGDALLLSRP LGVGVLFAAA MAGVAKPKDV EAALRTMNQS
QHRLVDGLQK HGADIHACTD VTGFGLLGHL GEMLQGSEPI TIQLWPNRIQ AHPGALDLLD
QGIASSLAPA NRDAWSWLEG PVQLNASPSQ ACLELLVDPQ TCGPLLLACT AAAAECLMAQ
DSAWIQVGIA GSGHG
|
|---|
| |