Gene Syncc9605_0218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0218 
Symbol 
ID3735726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp224889 
End bp225800 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content65% 
IMG OID637774798 
Productdeoxyribodipyrimidine photo-lyase family protein 
Protein accessionYP_380549 
Protein GI78211770 
COG category[L] Replication, recombination and repair 
COG ID[COG0415] Deoxyribodipyrimidine photolyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCAGCG CTGCGTCACC CCCGATCAAC GGCGACCTGC CGCGGCAATT CGCGTCCCGC 
GAAGCCCTCA ACACCCTGCT GGCGCAAGAG TTCCCAGGAG CGGAAGGGGA GCTCAGCCCG
ATCCGCGGTG GGCGTGTGCC AGCTGAAGAG AAACTGCGGC GCATTGACGC GAGGCGCTAC
GCCAAAAGCC GAAATCACCT CAGGGGCGCG GTTACCGGGC TGTCGCCCTA CATCCGCCAC
GGCGTGCTGA CCCTCGCGGA GGTGCGCGAT TCAGTGTTTG AACGGATCCG CAACCGCGAT
GAGGGCGGAA AGCTAATCAA CGAACTCGGC TGGCGAGACT TCTGGCAACG GATGTGGCTC
GATCTGGGGG ATGGCATCCA TGACGATCAG GAACCGTTCA AGACGGGCCA TGACGCTGGT
GCCTATGCCC AGGAGCTGCC GGCCGATGTG CGCGCCGGGA CCACAGGGCT GGCCTGCATG
GATGGCTTCC GTGATCAACT GGTGAGCACC GGCTGGCTTC ACAACCACGC CCGCATGTGG
ATGGCCGCCT GGCTCGTGCA TTGGCGACGG GTCCACTGGA AGGCTGGAGC CGACTGGTTC
CTGGAGCACC TGCTGGATGG CGACCCGGCC AGCAACCATC TGAGCTGGCA GTGGGTGGCC
AGCACCTTCA GCCACAAGCC TTACTTCTTC AACCGCGGCA ATCTGGAGCG CTACAGCGAA
GGGCAGTACT GCAACAGCTG CCCCAGCGCG AACAGCTGCC CCTTTGAAGG CAGCTACGAC
CAACTCGAAA ACCAGCTGTT CGCTCCTATG CCAGCCATTC GGGAGACCGG CAACAACCGC
AACCAGCAGC GCAACCGCCA GCGCCGGAGC AGCGGGGGCG CCAGTGCCGC CCTGGCCCGT
CCCAAGCGAT AA
 
Protein sequence
MPSAASPPIN GDLPRQFASR EALNTLLAQE FPGAEGELSP IRGGRVPAEE KLRRIDARRY 
AKSRNHLRGA VTGLSPYIRH GVLTLAEVRD SVFERIRNRD EGGKLINELG WRDFWQRMWL
DLGDGIHDDQ EPFKTGHDAG AYAQELPADV RAGTTGLACM DGFRDQLVST GWLHNHARMW
MAAWLVHWRR VHWKAGADWF LEHLLDGDPA SNHLSWQWVA STFSHKPYFF NRGNLERYSE
GQYCNSCPSA NSCPFEGSYD QLENQLFAPM PAIRETGNNR NQQRNRQRRS SGGASAALAR
PKR