Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0157 |
Symbol | |
ID | 3735766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 159517 |
End bp | 160668 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637774737 |
Product | putative glycolate oxidase subunit GlcE |
Protein accession | YP_380488 |
Protein GI | 78211709 |
COG category | [C] Energy production and conversion |
COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.596412 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0817623 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCCATT CCCCCGCCAG CCGCAGCGCT CTGATCGACC TGGTGCACCA GTGGCATCAG AGCGGCACCC CCTGGAGTCC CAGTGGCCTG GGAACACGCC TGGACTGGGG CCCAACGCTG GGTCCATGCC ATGAGGTGCT CTCCTGCCGT CAGCTCAACC GGGTGATCGA CCATGCCGTG GACGATCTGA CGATCACCGT GGAAGCCGGT CTGCCGCTTC AGGACTTGCA GGATCTGCTG GCGCAACAGG GCCAATGGCT GCCGATTGAC TGGCCCCGAG CCGGCGCTCC CGGCAGCATC GGCGGCCTGG TGGCCCGGGG TCTGGCCGGC GGGCTGCGTC ACCGCCATCT GGGGGTGCGG GATCAGATCA TCGGCATCGG CCTTTTGCGG GCGGATGGCA CCGAAGCCCA CGCCGGTGGA CGGGTGGTGA AGAACGTGGC GGGCTACGAC CTGATGCGGC TGCTCTGCGG CAGTTGGGGC AGCCTGGCGC TGATCACCGA ACTCACCCTG CGGCTGCAAC CGCTGCGCCC CGCCCGGAGC AGCCTGATCG TGAACGGCGA GCTGGCGGCT CAGGAAGCCT TCCGCAGCGA ACTGCTGCGC TCCAGCCTCA CACCGGAACG CTGTGACTGG ATCAACAACG GCGACGGCGC CTGGCGGCTG CGACTGGTGG TGAGCAGCGT CTCGGAGCAG GCGGTGGAGG AGCAGTTCAA CAGCCTCGAG ACGTTGGCGC GGAACCAGCA ACTCAACGCC GAACGCCAGC CCTGCGCCGA TGCCCTGACC ACGCCCCTCG ATGCCAGCCC CTCCGCGCAA CTGGTGCGGC TGGTGCTGCC GCCAGCCCAG ATGCAACGGT TGCTGCGGGA TGAAGCCATG AAGGCTCTGA AGACGTGGTA CTGGGAGCTG GCCGCCGGAG CCGGCTGTGG CGATGGCTGG TGCGCTGTCG CAACGGCAGA TCACCAACTG GAAGCGTTGC GCCGCAGCGT GATCCGCCTT GGCGGCGAAA TGACGCTGTT GAAACGAGCA GCCGGATCAA CTGTGCCGGC CTGGCTTGAC CGTCCCTCCC GTCCGCTAAT CGAAGCGGTG AAACGCCAGT TCGACCCCAA ACTGCAGCTC AGCCGCGGCC GGCTGCCGGG GGTGAATCAA GAGACGCTGT AG
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Protein sequence | MSHSPASRSA LIDLVHQWHQ SGTPWSPSGL GTRLDWGPTL GPCHEVLSCR QLNRVIDHAV DDLTITVEAG LPLQDLQDLL AQQGQWLPID WPRAGAPGSI GGLVARGLAG GLRHRHLGVR DQIIGIGLLR ADGTEAHAGG RVVKNVAGYD LMRLLCGSWG SLALITELTL RLQPLRPARS SLIVNGELAA QEAFRSELLR SSLTPERCDW INNGDGAWRL RLVVSSVSEQ AVEEQFNSLE TLARNQQLNA ERQPCADALT TPLDASPSAQ LVRLVLPPAQ MQRLLRDEAM KALKTWYWEL AAGAGCGDGW CAVATADHQL EALRRSVIRL GGEMTLLKRA AGSTVPAWLD RPSRPLIEAV KRQFDPKLQL SRGRLPGVNQ ETL
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