Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4923 |
Symbol | |
ID | 6119304 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 5923440 |
End bp | 5924432 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641636508 |
Product | catalase domain-containing protein |
Protein accession | YP_001763267 |
Protein GI | 170729241 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0753] Catalase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000393205 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGATTCAT ATCGTCTTGT TTCGTTTATA AATACCTGCT TACTGACAGG TGTCACCGTG CTTTCATCTT CTGTATTCGC TGCTGATAGA AGCAGTGCTG AGCTGGTGGA TGCCGTCAAT GGCACGCCTG ATTCAGCCAG TCGTGAGGCG GGTAAAAAAG TTAAATTGCG CAATCATGCG AAGGGTTTTT GCACTTCAGG GTCGTTTATT CCTAACCCTA AACTGCACAA CACCTTGGCT ATTCCCTTTT TTAAACAAGC AGAAATACCT ATCACCGCAC GTTTCTCCCT TGGTGGGACA AATCCACATG CATCGGATAG AGGTGCGGGG CGCTTTATGT CGCTTAAGAT TGATGGTGAC AAGGAGAGCC TTAATTTTGT GACGACTAAT TCTCCGGTCT TTTTTGCCAG TAATTTGGAG GAGTTTTTCA ACTTTCAAAC AAAGGTGAAG CAGGGAGCTG AGGGTAAACA ATGGCTTGTG GATAATCAGC CAAATGCTAA AGCGTTTTTT GATTACATCA AAACCTTGCC GCCGAGTGCC AGTTTTGCCA ATAGCCGCTA TTTTGGGGTT AACAGTTTCC TGTTTAGTGC AAATAATGGC GATATTAAGC CTGGACGTTG GAGTTTTGAA CCGGTTGATG GAGTGGTTAA TCTTAGCCAA AACCAGCTTG ATAAGTTACC AAACAACTTC TTAAAAGATG AATTGTTAAC TCTTATTCAA CAAAAGCCCG CTATCTGGGA TCTTTATATT CAGTTAGCAG AGCCCGGTGA TGAGATTAAC GACCCCACAG TATTATGGCC TGAGACACGC CAACGCCTGT TAGTCGGGCA AGTGTTGATT GATGGCAGCA GAGACAGTGA GAGTGCAACT ATGCAGTGTG ACAGGGGAAT ATTTAACCCG GTACTATTGC CTGAAGGGAT CAAACCTTCT GCTGACCCCA TATTAAATGC TCGCACTCCC GCCTACATTG AATCATTTAT CCGCCGCCAA TAG
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Protein sequence | MDSYRLVSFI NTCLLTGVTV LSSSVFAADR SSAELVDAVN GTPDSASREA GKKVKLRNHA KGFCTSGSFI PNPKLHNTLA IPFFKQAEIP ITARFSLGGT NPHASDRGAG RFMSLKIDGD KESLNFVTTN SPVFFASNLE EFFNFQTKVK QGAEGKQWLV DNQPNAKAFF DYIKTLPPSA SFANSRYFGV NSFLFSANNG DIKPGRWSFE PVDGVVNLSQ NQLDKLPNNF LKDELLTLIQ QKPAIWDLYI QLAEPGDEIN DPTVLWPETR QRLLVGQVLI DGSRDSESAT MQCDRGIFNP VLLPEGIKPS ADPILNARTP AYIESFIRRQ
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