Gene Swoo_4922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4922 
Symbol 
ID6119303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5922956 
End bp5923387 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content44% 
IMG OID641636507 
Producthypothetical protein 
Protein accessionYP_001763266 
Protein GI170729240 
COG category[S] Function unknown 
COG ID[COG3059] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000341805 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAACAA CAAATTTTGG CTATCTGTTT GGTGTGCTAG GTGTATCTTT GGTGTTGCTG 
TGGTTGGGCG TTTATAAGTT CACTGCTACT GAGGCTAAGT TGATTGAGCC CTTGATAGTG
AACCACCCCT TGTTAAGTTG GGTTTACCAA GTGCTCTCTG TACAAACGGT TTCGAATCTT
ATTGGCTCGG TTGAAATTCT TGTAGGCATA GGCCTGCTGT TGGGATTTAA AAACGCAAAA
GTCGGTTTGG TATCTGGGCT ATCTGCTGTG GGTATTTTTG TAGTGACACT CAGTTTTATG
CTGACAACAC CGGATACCTG GAAAGTCTCA GATGGCGTGC TGATCACTAA CTTCTTTCTG
CTTAAAGATT GGGTGTTTCT TGCCATCGCA ATCATGGTGG TTGAAACACA TCGAGGCGCA
TTAAAGGGAT AG
 
Protein sequence
MKTTNFGYLF GVLGVSLVLL WLGVYKFTAT EAKLIEPLIV NHPLLSWVYQ VLSVQTVSNL 
IGSVEILVGI GLLLGFKNAK VGLVSGLSAV GIFVVTLSFM LTTPDTWKVS DGVLITNFFL
LKDWVFLAIA IMVVETHRGA LKG