Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4799 |
Symbol | |
ID | 6119176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 5786065 |
End bp | 5786904 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641636380 |
Product | ribokinase-like domain-containing protein |
Protein accession | YP_001763143 |
Protein GI | 170729117 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00319508 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTAATA TTCTTCTCGT GGCTAACCTC AACTGTGATC GTATTCTGAA TCTGGATAGA CCCTTGCAGA TGGGCGGGCG TTTTCATTAT CAAGATGGTG GACAAAGACT GGGTGGTGGT GGAGCCAACA CAGGGATTGG ATTGGTTTGG GCCAAACATA GGGTTGCCCT TGTGAGTCAA GTTGGCAGAG ATAAGGTGGG GGACTGGTTG CTTGCTGAAG CGAGCACTCA AGGGATAGAT TGTCACCTTA TTCAACGTCA TAAAGAGAAC TCCTGTGAGA TGCTACTTGT GATGACTCCC GATGGAGAGC GCACGATTAT TCGCCCTCAA AGGCCTGTAT TTGAACTGGC ATCACCACCA GTGTGGCAGC AATGGGATGC GGTATATTTC AACTCCTCGG CTGAGGGAAG TGTTAGTTGG GCTAAAACAG CACTGAAAAA CTGCTTGGTA CTAGCTCAAT TAGCCAAGGA TGAACGTCCT AGGCCCTGTG ATATCTTGAT TGCGTCGAAA ACTGATATGC AGGGGCGTAG TCAACTCTCT CCATGGGAAT ATGGTTTAAC CATCGCTGGA GACTCTCTTA AATATTTTAT TGTGACCGAT GGTGCTGATG GTGCCTATCT GTATACCGAG AACGATTGCC AACAGGTGGA AGCTACGCCG TCTGAAGTGA TTGATACGAC TGGCGCTGGA GATGCTTATG CGGCTGGTTT GATACATGGC CTTACTACAG GGTTAGGTAT TCTTGAGTCC ATGAAAGAAG CCGGAGTGTG GGCTGGGTTT GCGGTTGCGA CACAAAGCTC GATACCTGGG GAGGGGTTGA AGCAGTATCT GAACAATTAG
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Protein sequence | MANILLVANL NCDRILNLDR PLQMGGRFHY QDGGQRLGGG GANTGIGLVW AKHRVALVSQ VGRDKVGDWL LAEASTQGID CHLIQRHKEN SCEMLLVMTP DGERTIIRPQ RPVFELASPP VWQQWDAVYF NSSAEGSVSW AKTALKNCLV LAQLAKDERP RPCDILIASK TDMQGRSQLS PWEYGLTIAG DSLKYFIVTD GADGAYLYTE NDCQQVEATP SEVIDTTGAG DAYAAGLIHG LTTGLGILES MKEAGVWAGF AVATQSSIPG EGLKQYLNN
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