Gene Swoo_4753 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4753 
Symbol 
ID6119130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5734580 
End bp5736385 
Gene Length1806 bp 
Protein Length601 aa 
Translation table11 
GC content47% 
IMG OID641636334 
Productbeta-propeller repeat-containing protein 
Protein accessionYP_001763097 
Protein GI170729071 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000225473 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000282965 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAACCTCA GCACTAAATC ATTGCTTTCA CTGCTGCTAT TGGCAGGTTT AAGCACTTCA 
ATCCAAGCTG CAATTAAGCC CTACCCTTCA GGGTTAATCA TGCGTGGAAA ATATGACGGC
ACTAAATGCG AGGCACCACG AGGCAATATG GCTGCCGGAT ATTGTCAGGT CTACTGGAAA
GATATTGAGC CAGTGAAAGG CCAATTTAAC TGGAGCGTGA TTGATAACGC TATAACCTCA
GCTCAGACCC ACAACTCAGG AAAAGGCGTT TCCAATAAGG ATGGCTATAA GGTAATGATC
CGGATTCGTA CTGGCGTCTA TTCACCAGAC TGGGTTAAGA ATGATCCAAA CGTGAATAAG
ATTACTTGGT ACTTTAAAGA TACCAGTGCT AACCAAACTC ACCAATTACC CCTATTTTGG
AACTCCCCCT ACCAAAACCA TTATGAAGAT CTAATGCAGG CAGCTGCCAC TCGTTACGAC
GATAATGACT CTGTAGGTGG TGTAGCGGCC TCCATGTGTA TGACTGTACA TACAGAGATA
ATGTGGAATC GAACGGGTCG TAAGGAGGTA CGCTCAACGA ATATGTCAGC CATGCGCGCA
CTTGGTGGAA ATCGCTACAC CAATGAAAAA GACTATGCCT GCCTGCAGCG CCAAATACAG
ATACATGCTG ACAACTGGCA CAACACGCCA ACCCTATTTG GTAGTCACCT TTATCAGGAG
TATAACTACA GCAATGGAGA GAAGAACAGT AACTACAATA AGACTAAACA ACTCTTTGAT
GAATGCCGAA ACAGTAGCAA GCTAGGGAAG CGCTGTATAT TAGGTAATAA CAGTCTGCGC
CATGATGAAG TCAACAATGA TGGCTCAATC AACCAGCTCC TGTTTGAGGT TGCACAAGCA
GGGGATCCGG TTTATTTCCA AACCAATGTA TTTAAAGACG ACGCAAATAA GCCTTTCGGC
GTCAATGAAC TCAAGGGAGC AATGAACAAT GCTGCCAATT GGGGAGCAAT ATCGGTAGAG
ATGCCCATGG CTTGGGACTG TAGTAATGTT CATAACAAAA CAGGCTGCAC CCAAGCAGTA
ATAGATCAAC GCCAAAATGA GTTTCACACC TATCAGGCCA GATTGAAGAA TAACTTCCGC
CCTGCCGATG CCACAGACAC CAACCGCTAT GTTCGAACCC GCCATAATCT CTCTGGTGCT
GGTTGGGTAC ATAACTCAGG TGCGCTGAAT CAACTGTCCT CCACCAGCAG TGGTGAAGTA
TGGGGACTTT CAGGCCAAAG TATTTGGTTT CGCCCTAGTC AACATGCTAG CTGGCAAAGG
GTTTCGGGGG CTCTCACCCA TATTCAAGTT GCAGGGAAAG GACGCGTGGT TGGCGTTAAT
ACCCATGGCA ATCTATACCA AAGAGATCGC ACCAACAATC GTTGGACAGG TCTTAGCCGC
CCATCACTTA ATAGCGGTGA GAAGCTGGTA ACTGTAGATA CCACCGATAA TGGCATATTG
TGGGCAACCA CCTCAAACAA CCGTATCTTC AAACGCACTG CCGCCGGCAG CTGGTCCCGT
ATCAACGGCG GCCTAAAGCA GATATCGGTT AATGATAATG GCAGCGAAGT TTGGGGCATT
GCGCCTAACA ACTCTATCTG GCGTTGGAAT GGATCAGGCT GGAGTAAGAT AGGCGGCAGC
CTGAAGCAAA TTTCGGCAGG CACCCATGGT AATGTCTGGG GAGTAAACAG TAACAATACT
GTTTATTATC GTGATGGAAG CCGTTGGCAA TCACTCGGGC AAATGAAAAC CGTATCTGCC
AGATAA
 
Protein sequence
MNLSTKSLLS LLLLAGLSTS IQAAIKPYPS GLIMRGKYDG TKCEAPRGNM AAGYCQVYWK 
DIEPVKGQFN WSVIDNAITS AQTHNSGKGV SNKDGYKVMI RIRTGVYSPD WVKNDPNVNK
ITWYFKDTSA NQTHQLPLFW NSPYQNHYED LMQAAATRYD DNDSVGGVAA SMCMTVHTEI
MWNRTGRKEV RSTNMSAMRA LGGNRYTNEK DYACLQRQIQ IHADNWHNTP TLFGSHLYQE
YNYSNGEKNS NYNKTKQLFD ECRNSSKLGK RCILGNNSLR HDEVNNDGSI NQLLFEVAQA
GDPVYFQTNV FKDDANKPFG VNELKGAMNN AANWGAISVE MPMAWDCSNV HNKTGCTQAV
IDQRQNEFHT YQARLKNNFR PADATDTNRY VRTRHNLSGA GWVHNSGALN QLSSTSSGEV
WGLSGQSIWF RPSQHASWQR VSGALTHIQV AGKGRVVGVN THGNLYQRDR TNNRWTGLSR
PSLNSGEKLV TVDTTDNGIL WATTSNNRIF KRTAAGSWSR INGGLKQISV NDNGSEVWGI
APNNSIWRWN GSGWSKIGGS LKQISAGTHG NVWGVNSNNT VYYRDGSRWQ SLGQMKTVSA
R