| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4148 |
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| Symbol | |
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| ID | 6118499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5046352 |
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| End bp | 5047992 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641635710 |
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| Product | integral membrane sensor signal transduction histidine kinase |
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| Protein accession | YP_001762499 |
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| Protein GI | 170728473 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.621708 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAAAT TCACTGGCCA GCTAATTCAT AGCCCTATGG GTTTTAAGCT AACGCTATCA
ATTATTATTT TTAGCTCGTT AATCACCATA TTAACAACTG GCTTTCAACT CGTAAGTGAC
TATAAAAGCG ATGTCGATAG GATCGACCGA CAATTTGACA ACATAGAGAA AGTGAACCTA
GATGTGTTAG CTGCTAGCAT CTGGGTGATA GATGAGCGTC TTATCAACAC TCAACTTCAT
GGCCTTATTC AGCTTCCCGA CATCACCTAT ATCTCAATCA ATGATGATAG CGGTCAGGAA
TGGATTGAAG GAGAGCCATC ACTGGAAAAT ACGATAGAGA GAACCTTTGA TCTCTCGTAC
CGCTCTGGAA ATGAGCAGAT CCCTGTAGGT ACTCTTCTTA TTCAAGCAGA CCTCAAAGCT
GTGTATGACA AGCTGTTAGA TCGCGCCATT ATTATCTTAC TCACTAATGC GATAAAAACC
TCTATTGTCG CTGGATTCAT ACTCTTCCTT ATCTGGTATA TGGTTACCCG TCATCTGCAC
CGTTTAAGCC AGTACTGTCA AAATATCGAC CTTGATTCCC CTTTCGAACC ATTAAGTTTC
GAGCAAAGCG AAAATAAGAA TGATGAGTTT CGTCAAGTTT CCCTCGCCAT TAACACCATG
CAGCAACAGT TAAGGGCCTC CTTCTCCGAT ATCAAGCGTT CTAAACAGGA GCTGCAAGAT
GCCCTCACAG ATAGAGAAAG GTTATTAGCA CTGGAAACCA GCTATAAAGA GGAGCTTTCT
AGTCAGGTTA AGGAAAAAAC TCAAGAACTT GAGCAATCGG TTTTAGTTTT AAAACGCGCA
CAAGAGGTGT TAGTTGAGCA GGAGAAGATG GCGGCGCTCG GTGGCCTAGT CTCCGGAGTT
GCTCATGAGA TAAACACTCC CATAGGAATA TGCTTAACGG CCGCCAGCTC ACAACTTAAT
CATATCGATG AACTGATAAA AGTCATTCAC AGTGAACATG CCACCTTAGA GGAGTTAAAC
TCTATTCTAG AGGAGCATCA GGTAAGTTGT GAGCTCATTG TCAACAACAT TACCCGTGCT
AGCAGCCTCA TTCAAAAATT CAAAACAGTG GCGGCTCAAC AGAGTCAGGA GGAGAAGCGC
AGCTTTAATC TCCAACAAGA ACTGGTAGAT AGCCATGAAT CAGTCAAAGT GCTGTTTCCC
GAAATTAAGG TAGAGCTCCA ACTGGATCTG AACCCAGCTC TCTGCATTAA AACGAACCAT
AACCTGCTAA AGCAGATCAT CACCAATGTT CTTTCTAATG CTTACTCGCA TGCCTTTAAG
CATGTTGACA CGCCTGTGAT TAATATTAAG GCCCAACTGG ATGATCAGCA GCTTAATATC
TTTATTCAGG ACAATGGCTC TGGTATCAAT GAAGAGGATT CAACTCGTAT TTTTGAACCT
TTCTTTACCA CATCACGACA TAAAGGTGGG ACAGGCTTGG GTCTGTCCGC AGCCTTTAAT
GCAACCACTT TACTTAAAGG TGGCATTAAA TTGGTCAAGA ACTCTGAATT AGGCGGAGCC
TGTTTCCATA TTGATTTCCC CGTGGATGAG GGAGAAGAGG AACAAGTTGA CTCAGATATC
TTTTTCGAAA ACTTAGATTA G
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| Protein sequence | MQKFTGQLIH SPMGFKLTLS IIIFSSLITI LTTGFQLVSD YKSDVDRIDR QFDNIEKVNL
DVLAASIWVI DERLINTQLH GLIQLPDITY ISINDDSGQE WIEGEPSLEN TIERTFDLSY
RSGNEQIPVG TLLIQADLKA VYDKLLDRAI IILLTNAIKT SIVAGFILFL IWYMVTRHLH
RLSQYCQNID LDSPFEPLSF EQSENKNDEF RQVSLAINTM QQQLRASFSD IKRSKQELQD
ALTDRERLLA LETSYKEELS SQVKEKTQEL EQSVLVLKRA QEVLVEQEKM AALGGLVSGV
AHEINTPIGI CLTAASSQLN HIDELIKVIH SEHATLEELN SILEEHQVSC ELIVNNITRA
SSLIQKFKTV AAQQSQEEKR SFNLQQELVD SHESVKVLFP EIKVELQLDL NPALCIKTNH
NLLKQIITNV LSNAYSHAFK HVDTPVINIK AQLDDQQLNI FIQDNGSGIN EEDSTRIFEP
FFTTSRHKGG TGLGLSAAFN ATTLLKGGIK LVKNSELGGA CFHIDFPVDE GEEEQVDSDI
FFENLD
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