Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4041 |
Symbol | |
ID | 6118391 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 4918504 |
End bp | 4918956 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641635602 |
Product | MarR family transcriptional regulator |
Protein accession | YP_001762392 |
Protein GI | 170728366 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCCTA CTGCAGGTAA TTTAAAGTCA GAGCTAGCTA AACTTTTAGT TCAAAATGAA CGTCTTTTAG ACAAAAAACT AGAGTCAGCC TTACAGCAAA GAAAAAAAAC GCTTGGTAAT GTGCAGTGGC GAATACTCAC CAATCTTATT GAAGCCAGCG AAGGCTTAAG CATGAAAGAC CTATCTCTAT TGACCCACAC CAACGATTCA ACCCTGACGA AAGTGGTTGA TAAGCTTGTC AACGACAGCT TGGTATATCG TCGACCTCAT CCAAAAGACA GACGAAAAAT ACTTATCATC AGCAGCAGTA AAGGTAAGGC ACTCCATGCC AAGCTAGAAA GTGATGTGAA TCAATGCTAT GAAAAAATGT TTGAGCCACT ATCAGCACAA CAGATGAAGT CTTTACAGAA TATTTTACAG ACACTAAACA ATGAAGGTTC TCTGACTCTG TAG
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Protein sequence | MSPTAGNLKS ELAKLLVQNE RLLDKKLESA LQQRKKTLGN VQWRILTNLI EASEGLSMKD LSLLTHTNDS TLTKVVDKLV NDSLVYRRPH PKDRRKILII SSSKGKALHA KLESDVNQCY EKMFEPLSAQ QMKSLQNILQ TLNNEGSLTL
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