Gene Swoo_4041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4041 
Symbol 
ID6118391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4918504 
End bp4918956 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content40% 
IMG OID641635602 
ProductMarR family transcriptional regulator 
Protein accessionYP_001762392 
Protein GI170728366 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCCTA CTGCAGGTAA TTTAAAGTCA GAGCTAGCTA AACTTTTAGT TCAAAATGAA 
CGTCTTTTAG ACAAAAAACT AGAGTCAGCC TTACAGCAAA GAAAAAAAAC GCTTGGTAAT
GTGCAGTGGC GAATACTCAC CAATCTTATT GAAGCCAGCG AAGGCTTAAG CATGAAAGAC
CTATCTCTAT TGACCCACAC CAACGATTCA ACCCTGACGA AAGTGGTTGA TAAGCTTGTC
AACGACAGCT TGGTATATCG TCGACCTCAT CCAAAAGACA GACGAAAAAT ACTTATCATC
AGCAGCAGTA AAGGTAAGGC ACTCCATGCC AAGCTAGAAA GTGATGTGAA TCAATGCTAT
GAAAAAATGT TTGAGCCACT ATCAGCACAA CAGATGAAGT CTTTACAGAA TATTTTACAG
ACACTAAACA ATGAAGGTTC TCTGACTCTG TAG
 
Protein sequence
MSPTAGNLKS ELAKLLVQNE RLLDKKLESA LQQRKKTLGN VQWRILTNLI EASEGLSMKD 
LSLLTHTNDS TLTKVVDKLV NDSLVYRRPH PKDRRKILII SSSKGKALHA KLESDVNQCY
EKMFEPLSAQ QMKSLQNILQ TLNNEGSLTL