| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3407 |
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| Symbol | |
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| ID | 6117739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4168060 |
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| End bp | 4168953 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641634962 |
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| Product | ApbE family lipoprotein |
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| Protein accession | YP_001761770 |
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| Protein GI | 170727744 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.935025 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAAT ACCGTTTAAC GGCAACCCCT TGGGGCTATA TGGGGGAATT TTCCGCTATG
GCCAGTCCCT GCGAGCTTCT AATTGAGACT GATAATAAAC AGATAGCAGA TGCCATGATG
GCACTGGCCT GCACGGAAAC CCTAAGAATT GAGCAAAAAT ACAGTCGATT TATTAAGGGC
AATACACTTT GGCAACTCAA CCACAGTCAC CCAGAGGCTA TAGAGTTAGA TCAAGAAACC
ACAAACTTGC TGCAGTTTGC CAAACACTGC TTTGAGTTAA GCCAAGGTAA GTTTGATATC
ACATCTGGGC CCTTAAACGC CCTGTGGCGA TTCGATAAAC AGGGAAAACT TCCCAAAGAG
AGTGAGCTTT GTCAGGCTCG CCAGTCTGTT GGATTTTCTC GATTAACCCT CAACCGCTCT
CAGCTCACTA TGCCTGAAGG TATGATGTTA GATCTTGGCG GAATAGGTAA AGAGTACGCC
GCAGACCGTG TCGCCCATCT ACTTGCTCAT CACTGGCGGG ATATTGCGGT TTTAGTCAAT
TTCGGTGGTG ATATCGCTTG CCCAATTGCA AAGCGTTTCG GTGAGCCAGA GTGGCAGGTC
GGTATTGAAA ACCCCGAAGC ACTGGACAGT GCTGCAGAAA TCGTCTCAAT CCGTCAAGGC
GGCCTTGCCA CCAGCGGGGA TACACGGCGA TTTATTGAGA TTAACAACAA ACGATTTGGC
CATATTATCA ACCCTAAAAG CGGTTATCCT ATCGAGGGTG CACCGCGCTC GGTCACTGTT
ATGGCTGATA ACTGCACCAC GGCTGGTATG CTAGCCACTA TGGCGATGCT AGAGGGAGAT
GATGCTGAAA ACTTTTTAGC CGAGCAAGAG GTAGGCTTTA GAGTATTTCG CTAA
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| Protein sequence | MAKYRLTATP WGYMGEFSAM ASPCELLIET DNKQIADAMM ALACTETLRI EQKYSRFIKG
NTLWQLNHSH PEAIELDQET TNLLQFAKHC FELSQGKFDI TSGPLNALWR FDKQGKLPKE
SELCQARQSV GFSRLTLNRS QLTMPEGMML DLGGIGKEYA ADRVAHLLAH HWRDIAVLVN
FGGDIACPIA KRFGEPEWQV GIENPEALDS AAEIVSIRQG GLATSGDTRR FIEINNKRFG
HIINPKSGYP IEGAPRSVTV MADNCTTAGM LATMAMLEGD DAENFLAEQE VGFRVFR
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