Gene Swoo_3395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3395 
Symbol 
ID6117727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4153523 
End bp4154086 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content45% 
IMG OID641634950 
Productankyrin 
Protein accessionYP_001761758 
Protein GI170727732 
COG category[R] General function prediction only 
COG ID[COG0666] FOG: Ankyrin repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.837562 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAGCT CTCTCTCATT AAAATCTATC TTTATACTGC TCAGTGTAAA CTTAGGTGTG 
AGTGTTCTTG TCTCCCTTTT GTATGTCTCC TACTCCTTGG CGAGTCCTTT AGAACTTGAT
AAAAAACACA ACTTAGCCCA GAATCATTTA AGCTCACAAA AAGATGAAAA CAGGGACGCA
CAACTCTTAA TGGATTACTT CTTTGCCGCC GCTAGAACTG GCGATGTGGA GGTTTTAACT
CATTTTATCG AAGCGGGTTT TCCCATCGAC CAGCGTAACA ATCAGAGCTA CACCGCCCTG
ATGGTGTCAG CTTATAACGG GCAGGAACTC GCCACCCAAG CTCTGCTTGA CCATGGCGCC
AATGCCTGCC TGCAGGATAA ACGGGGAAAT ACCGCAATCA TGGGCGCAGT GATAAAAGCA
GAGTTTTCAA TTATCAAGCA GCTCTACAGC CAAGAGTGTA ACGCTGAGCT CACCAATAAA
TCAGGCATGA CATTGGACGA TTTTGCTCAG TATTGGGGTC AAAGTGACAA ACTAAGGGAT
GCTAGCTTGG CTGCTAAACA ATAA
 
Protein sequence
MSSSLSLKSI FILLSVNLGV SVLVSLLYVS YSLASPLELD KKHNLAQNHL SSQKDENRDA 
QLLMDYFFAA ARTGDVEVLT HFIEAGFPID QRNNQSYTAL MVSAYNGQEL ATQALLDHGA
NACLQDKRGN TAIMGAVIKA EFSIIKQLYS QECNAELTNK SGMTLDDFAQ YWGQSDKLRD
ASLAAKQ