Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3395 |
Symbol | |
ID | 6117727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 4153523 |
End bp | 4154086 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641634950 |
Product | ankyrin |
Protein accession | YP_001761758 |
Protein GI | 170727732 |
COG category | [R] General function prediction only |
COG ID | [COG0666] FOG: Ankyrin repeat |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.837562 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAGCT CTCTCTCATT AAAATCTATC TTTATACTGC TCAGTGTAAA CTTAGGTGTG AGTGTTCTTG TCTCCCTTTT GTATGTCTCC TACTCCTTGG CGAGTCCTTT AGAACTTGAT AAAAAACACA ACTTAGCCCA GAATCATTTA AGCTCACAAA AAGATGAAAA CAGGGACGCA CAACTCTTAA TGGATTACTT CTTTGCCGCC GCTAGAACTG GCGATGTGGA GGTTTTAACT CATTTTATCG AAGCGGGTTT TCCCATCGAC CAGCGTAACA ATCAGAGCTA CACCGCCCTG ATGGTGTCAG CTTATAACGG GCAGGAACTC GCCACCCAAG CTCTGCTTGA CCATGGCGCC AATGCCTGCC TGCAGGATAA ACGGGGAAAT ACCGCAATCA TGGGCGCAGT GATAAAAGCA GAGTTTTCAA TTATCAAGCA GCTCTACAGC CAAGAGTGTA ACGCTGAGCT CACCAATAAA TCAGGCATGA CATTGGACGA TTTTGCTCAG TATTGGGGTC AAAGTGACAA ACTAAGGGAT GCTAGCTTGG CTGCTAAACA ATAA
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Protein sequence | MSSSLSLKSI FILLSVNLGV SVLVSLLYVS YSLASPLELD KKHNLAQNHL SSQKDENRDA QLLMDYFFAA ARTGDVEVLT HFIEAGFPID QRNNQSYTAL MVSAYNGQEL ATQALLDHGA NACLQDKRGN TAIMGAVIKA EFSIIKQLYS QECNAELTNK SGMTLDDFAQ YWGQSDKLRD ASLAAKQ
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