Gene Swoo_2899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2899 
Symbol 
ID6117214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3543904 
End bp3544905 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content42% 
IMG OID641634443 
Producthypothetical protein 
Protein accessionYP_001761267 
Protein GI170727241 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0123115 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000697363 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTTCCAG CACAACTTTA TCCACCAGCA GATAGTGCAT TTGATTGGGT TCAGTTGACC 
TCATTTGAAC TCTTAAAAGG GGAAATAAAG ACCCTTTATG ATGACAAGCT TGAGTTTGAA
AGTGATGAAC TTGATACCCT GTATATCGAC TGGGAAGATA TCAAGGTTTT ACAAAGTAAT
GGCCTAGTCA GCGTCGGCTT TACCGATCTC AGCACCAAGA CCGGAAAGTT ACTGGTTAAA
GATGGCAAAA CCTATATTGG CGGCGAAGAG TTTGACCGCA CTAAGATAAT GACTATCATT
GCTGGCGAGC AGACAGAAGC AAACTACTGG TCTAGCAAGA TATCGCTAGG TGCTAACCTA
CGCTCAGGTA ATACCAAACA GCTTGATTAC AGCGCAATTG CCAATACTCA GCGCCGCACT
ACCGAATCTA GATATAATCT TGATTACTTA GGAAACTACT CTAAGACTGA GGGTGAGAAC
AATATCAATA ATCATCGTAT CAATACTTAC TTTGATTGGT ATTTGTCTAA ACAGTTTTAC
TTAAGACCTG TGTTTGCCGA AGTTTACATG GATCCAATTA AGAACATCCA ATACAAAACA
ACACTCGGCT TTGGTGTGGG TTACGACATC ATTGACAGCT CGAAAACAGA GTGGAGTATC
AGTGGCGGTC CAGCTTACAA CTACACCAAG TTTGATAATG TTGCACCAGG CGAGAAAGAG
GATGAGGGCA GCGCCGCACT TGTGGTCGAG ACTTACTTTG ATACAGAGAT TACCAGTGAT
ATCGACTTCA ACACTCTGTA TCGACTCCAA TATGGCAGTG AAACATCTGG TGGCTACACA
CACCATGCGG TAGCAGGTTT CTCCATTGAG TTAACCGACA TGTTTGATCT TGATCTCTCT
TTTGTTTGGG ATCATACCAA TAAACCACAA CCAGACTCAG ATAACACCAT ACCTAAGCAA
AATGATTACC AATTTATCAT CGGCTTCGGT ATCGATATCT AA
 
Protein sequence
MVPAQLYPPA DSAFDWVQLT SFELLKGEIK TLYDDKLEFE SDELDTLYID WEDIKVLQSN 
GLVSVGFTDL STKTGKLLVK DGKTYIGGEE FDRTKIMTII AGEQTEANYW SSKISLGANL
RSGNTKQLDY SAIANTQRRT TESRYNLDYL GNYSKTEGEN NINNHRINTY FDWYLSKQFY
LRPVFAEVYM DPIKNIQYKT TLGFGVGYDI IDSSKTEWSI SGGPAYNYTK FDNVAPGEKE
DEGSAALVVE TYFDTEITSD IDFNTLYRLQ YGSETSGGYT HHAVAGFSIE LTDMFDLDLS
FVWDHTNKPQ PDSDNTIPKQ NDYQFIIGFG IDI