| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2658 |
|---|
| Symbol | |
|---|
| ID | 6116957 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 3252671 |
|---|
| End bp | 3254389 |
|---|
| Gene Length | 1719 bp |
|---|
| Protein Length | 572 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 641634189 |
|---|
| Product | IucA/IucC family protein |
|---|
| Protein accession | YP_001761029 |
|---|
| Protein GI | 170727003 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG4264] Siderophore synthetase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.539637 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAAACA GTGAAGATTG GCAAAAGATA AACACTTCTC TATGCGCAAA AATTATTTCA
GAGCTTCACT ACGAGGAGCG ACTTTATCCC ACTGATAAAG GGGATTACTG GCAATTAAAT
ACCCCACACA GAAACTGGGA GTTTAAAGCC AAAGTGACGG TTTGGGGAAT GCTTGAGATT
GAGCCCTACT CCATGACGTG CTCCGACAAT CTGGCACCGC AAGCGTGCCA ATTATTATTG
GATACACAAG AGATGCTAAA AATCTCTGAC ATTAACCTTG CAAACCTTTT AGAAGAGATT
CAGCAAACGC TATATAGCGA TACAGTTCGG CTATCTAAGC TCCAAGGAGT GACAGCTTCA
GATCTAGTCA CTATGGATGA AACAGAGCGC CAACGTTATA TTGATGCACA CCCTAAAGCT
ATTGCAAACA AAGGCCGACT AGGTTGGGGA GAAGCATCGC TAAAAAACTA CTCTCCTGAG
TCAGGAAGCT CCTTTCAGCT TCATTGGTTA GCCATTGATA AGTCATACTG CAAGTCAGGG
ATCAGTGAAG AGATTAATTA CCTTCAAATA CTCAATAATG TTTTAGGGGA GTCTGAAGTG
CGCTCTCTAA CCAGTAAATT AGGAGAAGAC TCCGATAAGT ATTGGTTGGT CGCGGTTCAT
CCATGGCAGT ATCAACGTTT TTTAACCGGA CAATATGCAA GTCTGTTTGC AAATAAAACC
ATTGTAGACC TTGGTGAGCT AGGATCTGCT TGGTATGCAC AGCAGTCAAT TCGAACATTA
AGCTCAGCAT CGCAAGAGGT AAGGTTTGAT GCAAAAACTG CACTCAGTAT TTTAAATACA
TCTTGCTATC GTGGGATCCC TGGAAAGTTT ATCGTTCAAG GACCAAAGTT ATCAGCTTGG
CTAAAACAAC TAGCCAATGA GGACTCGACA TTAAGAGCTT GCGGCTTGCA TGTTCAGCAA
GAAATTGCTG GTTTCTACTG CCCGCACCCT TACCAATCTC AGATAGAGCA AGGTCCTTAT
CGATATCAAG AGATGCTAGG GTGTATTTGG CGAGAACGTG CCGAGCACGT ATTAAGCGTA
AACCAACGAC CGATAACAAT GGCGGCGCTA ATGCAAACCG ATTTACATGG AGATCCGCTC
ATTGGCGCTT TGATAAAAAA ATCGACTATT GATATCGAAC CTTGGCTAGA AAAGTTGTTT
TTCCATGTTG TCATACCTGT TTATCATCTA ATGTGCCAAT ACGGAGTTGG ACTTGTGGCG
CATGGTCAAA ACATTACTCT TGTGTTAGAG AATCACCAAC CTGTCGGTTG CATTATCAAA
GACTTTCACG GCGATCTAAG AATTGTTGAT CAAGACTTTG CAGAACTAGA CTCTCTCCCT
GCTGAGATAA GAGACGCACT AACTCGGCTC CCTGCAAACT ACTTGATTCA TGATCTATTG
ACTGGTCATT TTGTCACGGT ACTGCGATTT ATTTCGCCTA AAATTGCCGC TTTGGGACTA
AGCGAAATAC AATTTTATCG ATTACTTAAA CAGGTCATTA ACACTTATCA AGCACAGCAC
CCTCAACTGT CAGATAGATT CACGCAATTT AACCTGCTTA CGCCCGATAT CGATAAAGTT
TGCATCAATC GCGTTCGTTT TAAAATTGGT TACGGTGACA GTGACGAGCG ACCTCTACCA
GAAATAGGAA AGCCAATCAA AAATCCATTA ATGCAGTAA
|
|---|
| Protein sequence | MINSEDWQKI NTSLCAKIIS ELHYEERLYP TDKGDYWQLN TPHRNWEFKA KVTVWGMLEI
EPYSMTCSDN LAPQACQLLL DTQEMLKISD INLANLLEEI QQTLYSDTVR LSKLQGVTAS
DLVTMDETER QRYIDAHPKA IANKGRLGWG EASLKNYSPE SGSSFQLHWL AIDKSYCKSG
ISEEINYLQI LNNVLGESEV RSLTSKLGED SDKYWLVAVH PWQYQRFLTG QYASLFANKT
IVDLGELGSA WYAQQSIRTL SSASQEVRFD AKTALSILNT SCYRGIPGKF IVQGPKLSAW
LKQLANEDST LRACGLHVQQ EIAGFYCPHP YQSQIEQGPY RYQEMLGCIW RERAEHVLSV
NQRPITMAAL MQTDLHGDPL IGALIKKSTI DIEPWLEKLF FHVVIPVYHL MCQYGVGLVA
HGQNITLVLE NHQPVGCIIK DFHGDLRIVD QDFAELDSLP AEIRDALTRL PANYLIHDLL
TGHFVTVLRF ISPKIAALGL SEIQFYRLLK QVINTYQAQH PQLSDRFTQF NLLTPDIDKV
CINRVRFKIG YGDSDERPLP EIGKPIKNPL MQ
|
|---|
| |