| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2503 |
|---|
| Symbol | |
|---|
| ID | 6116787 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 3052938 |
|---|
| End bp | 3053639 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641634020 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001760875 |
|---|
| Protein GI | 170726849 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.148433 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAGCT CAGAGCAGAG TGGTTATAAC CCTGATAACT TGTCATCGGT AAAGCTATGG
GGGTTAGCTG TCAGTGCGTT GCTAACCGAG ATGAATGAGT TACGACACGA TGTGCTACAT
CACCACGGTA CGAGCGATGA GGATATCAAA GATTTAAAAC ATATGATGAT GCGTGATTGG
GGTATTGAAA CACGAGAAGA GTACCTCAAT ATGCTGAAAT GGTTACGTGA GGAGGGCCAT
AACCGCTCCT ATATGCAGAT GCAAGATCAC CTCAACACGT TATCTGAAAG CGCCATTGAT
GCCTATATTG ACGCTCATTC CCATAATGTC GATAGGCAGA GCTGTTTACA ACTGGTGAGA
AATTATCGAC ATACACTTAA TATTGGCGGA ATTGGTGCGT GGGATGATGG TCGCTATGTG
TCTATCTGTC GTTGGGGAGC TTCATTAGGT CTGTTTTCTG AGGATGAGTG TTGGGAAAAA
ATTAAGCAAA TTTCTCTAAG GGTTCAACAA TCTTACGACA GTTGGCATAG CTTCGCATTA
AGTTATATTG CAGGTCGCCA ATTTTGGCGT AATGATGCTA CTGAGTCCTT TGCTAAGGAT
GAGATGGACG TAGTTAGAAG GCTGACTGGT GATCCTAAAA GTCCTTGGAA TACGCTAGAG
TGGAATTTGG ACTTAACTGA AAACTGCAAT GGCACTGGGT GA
|
|---|
| Protein sequence | MNSSEQSGYN PDNLSSVKLW GLAVSALLTE MNELRHDVLH HHGTSDEDIK DLKHMMMRDW
GIETREEYLN MLKWLREEGH NRSYMQMQDH LNTLSESAID AYIDAHSHNV DRQSCLQLVR
NYRHTLNIGG IGAWDDGRYV SICRWGASLG LFSEDECWEK IKQISLRVQQ SYDSWHSFAL
SYIAGRQFWR NDATESFAKD EMDVVRRLTG DPKSPWNTLE WNLDLTENCN GTG
|
|---|
| |