| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2282 |
|---|
| Symbol | |
|---|
| ID | 6116552 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 2799510 |
|---|
| End bp | 2801504 |
|---|
| Gene Length | 1995 bp |
|---|
| Protein Length | 664 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641633789 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_001760658 |
|---|
| Protein GI | 170726632 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.330304 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACTTTC GTTGGGTTGG AAATTTAACA ATCACTAACA AACTGCTCTT AGTTATTCTC
CCCCCTATCT TAGGATGTAT CGTTTTTGGT TGTGCCATTG TTTATAATCA GTACCGCCTC
TCAACAGGTT TAGAGCAAGT AAAAGTGCTA AGTGAACTAG CTGTCGTCAA TAGCGATCTG
GTTCATGAAT TGCAAAAAGA GCGGGGCATG AGCGCAGGGT TTATAGGATC GAGAGGCCAA
GCTTTTGCGA ATACATTGCC AGCTCAAAGA GCAGCAACAG ATAAACAGTT GAACAGTTTT
AAGCATTTTG TCTCTAACAC CTCCCTACCT GAATCATTTT CGAGTCAACT AAGTCAATTA
AATCGCGATC TCTCACAGCT TAACTCGATG CGTAAAAGTA TTGATAGTTT AACCGTGTCA
GTAAAAGAGG AGGTGGCTTT TTATTCCCAG CTCAATAAAG GTTTACTTGG GATAGTGGAT
CATACAGCAA AAGAGGGTGA CAGCCAGGCT ATCGCTATTC AGGCGGCTTC TTTTAGCGCT
TATCTGCAGA TGAAAGAGCG TGCAGGTATT GAGCGCGCGG TACTGAGCTC GACGTTTGGT
AATCGTGAGT TTAAACCTGG TATGTTTTTG AAGTTTGCCA CTTTAGTGTC TGAACAGCAC
AGCTATGAGG AGCGATTTCT TGCATTGGCC ACACCAGAGG TTCAAGAGCA GTTTCGACAA
TTAACTCAAA CGCGAGCAGT AAAGGATGTA CACACCCTAC GTGAGCTAGC GTTCAGTGGT
AATGCCGATG AACTGAGTGC TCAAAGTGCT GAGCAGTGGT TTGCCAAATC TTCTGCTCGA
ATTGAGCTCG TTAGGCAGTT TGAAAAGTCA CTATCTAAGT CTCTGATCTC ACAAACAGAT
CAGCAACTGA GTGGTTCTAC ATCGCTTATG TATAGCATCA TAGTGCTGAT GCTGCTGACA
GGTTCCTTAG TCCTCTATAT CTCAGTCACT GTCGCTAGAT ACATGCATAC CCGATTACAT
TACCTTCATG ATAGCGTTAC AAAAGCCCAG AAGAACTTTG ATTTAAACAT ACGAATTGGA
GGGAATACGA ATGATGAACT GGGTCAGTTA GGTAACGCGT TCAATCAAAT GATGAGTGAT
TTTGAGAAGG TGATCCACCG CGTTAGAACC AACACTGATA GCCTGCTTAA AGCTTCTGAA
AAGATGGAGT CTTGCGCTAA TGTGATGCAA AGAGATGTGG CTATTGGCCA TAGTGAGACT
GAACAAGTAG CCTCTGCAAT GACAGAGATG AGCTGTACAG TACAGGAGAT AGCACTTAAT
GCTGTCAAAG CTTCTGAAGC TTCGACAGCT GCCAATATAG AAGCCAAAGA GGGCAATATT
GAAGTTGATA AAACGGCTGA AAGTATCCAC GAGTTAGCTG AAGAGATTGG TGATGCTTCT
AAAGCGATCA ATGAGTTGGA TAATGATATT CAAGGCATTG TCAGTGTTCT TGGGGTGATT
AGCGGTATTG CTGAGCAGAC AAATCTTCTA GCGCTTAATG CAGCCATTGA AGCTGCACGA
GCGGGTGAGA TGGGAAGAGG ATTTGCCGTG GTCGCCGATG AAGTAAGAAG TCTTGCTCAA
CGTGCCCAAA CCTCAACAGA GGATATTCGA GATATGACAG AGCGGCTTGA GAAAGGGGCG
GCAATTGCTG TACTTGCCAT GGAAAAAGGC AAGGCAAAGG CGGAGCTGAG CGTTAAGGAG
TCAGAGAAAG CAGGGCAGGA TCTGGATAAA ATTGTAGCTG AAGTCGGTAT TATCGATGCG
ATGAACGAGC AGATTGCCGC GGCGACTCAT GAACAATCAG CAGTATCGGA AGAGGTAAAT
CGTAACGCTC TTAAGATAAG TGAGATTTAT CAAAATACTC AAGCTATTGC CGATGAGCTC
AGTGCCCTTA ACGAAGGCTT GTTAGCCGAT GCGAATATGA TGTCTCAAGA GGTCAGTAAA
TTTAAAATTA GCTAA
|
|---|
| Protein sequence | MNFRWVGNLT ITNKLLLVIL PPILGCIVFG CAIVYNQYRL STGLEQVKVL SELAVVNSDL
VHELQKERGM SAGFIGSRGQ AFANTLPAQR AATDKQLNSF KHFVSNTSLP ESFSSQLSQL
NRDLSQLNSM RKSIDSLTVS VKEEVAFYSQ LNKGLLGIVD HTAKEGDSQA IAIQAASFSA
YLQMKERAGI ERAVLSSTFG NREFKPGMFL KFATLVSEQH SYEERFLALA TPEVQEQFRQ
LTQTRAVKDV HTLRELAFSG NADELSAQSA EQWFAKSSAR IELVRQFEKS LSKSLISQTD
QQLSGSTSLM YSIIVLMLLT GSLVLYISVT VARYMHTRLH YLHDSVTKAQ KNFDLNIRIG
GNTNDELGQL GNAFNQMMSD FEKVIHRVRT NTDSLLKASE KMESCANVMQ RDVAIGHSET
EQVASAMTEM SCTVQEIALN AVKASEASTA ANIEAKEGNI EVDKTAESIH ELAEEIGDAS
KAINELDNDI QGIVSVLGVI SGIAEQTNLL ALNAAIEAAR AGEMGRGFAV VADEVRSLAQ
RAQTSTEDIR DMTERLEKGA AIAVLAMEKG KAKAELSVKE SEKAGQDLDK IVAEVGIIDA
MNEQIAAATH EQSAVSEEVN RNALKISEIY QNTQAIADEL SALNEGLLAD ANMMSQEVSK
FKIS
|
|---|
| |