Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1909 |
Symbol | |
ID | 6116172 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 2350771 |
End bp | 2351325 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641633412 |
Product | OmpA domain-containing protein |
Protein accession | YP_001760288 |
Protein GI | 170726262 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3637] Opacity protein and related surface antigens |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0905316 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAAACAT TAACTATTGC AGCAGCTTCT CTACTCGCCA TTTTTGCATC AAGCAATGTG GCTGCAGCCA ATGACCATAG TGGTTTTTAT GTGGGTGGCA GTTTAGGACA ACTAAAAGTA AAAACAGAGG ATAGTGATAA TGGCTTAGGC TTTGGTGCCT ACGGTGGTTA TAACTTCAAT GATTGGTTTG GTTTAGAAGC CAACATGTAT CTTTCAGGAG ATCTTGGTGG CAATGGTTAT GATTTAGGTG CTGGTACGTT TGCTTTTACC CCCAAATTTA CTTACCAAAT TAATGACACC TTTGCTGTGT ATGGCAAAGT AGGTATCGCT TCTATGGCTG TTGTGTATCG ACCTGATAGA GGTATAGATG AAGACTTTAC TGGCTTTGGT TGGGTCTATG GTGTTGGTGT TAATGCCTCT ATTACTGAGA ACCTTAACAT CCGTTTAGGC TATGATATTG TTAAAGGCGA TCTCGACTCT GAGTATTCAT TCAGTGAGCA AAATGTGGAT ACTGATATCT CTAACTTTGC GCTAGGTATG CACTACCAGT TTTAA
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Protein sequence | MKTLTIAAAS LLAIFASSNV AAANDHSGFY VGGSLGQLKV KTEDSDNGLG FGAYGGYNFN DWFGLEANMY LSGDLGGNGY DLGAGTFAFT PKFTYQINDT FAVYGKVGIA SMAVVYRPDR GIDEDFTGFG WVYGVGVNAS ITENLNIRLG YDIVKGDLDS EYSFSEQNVD TDISNFALGM HYQF
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