| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1886 |
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| Symbol | |
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| ID | 6116149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2328261 |
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| End bp | 2330450 |
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| Gene Length | 2190 bp |
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| Protein Length | 729 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641633389 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_001760265 |
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| Protein GI | 170726239 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.270024 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.821548 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGTTT CAAAACTGTC TATATTAAAA AAGATTTCAC CTGTCGCGCT TGCTGTATCG
AGCACGCTAG CATCTGGCTA CGCTGTTGCA TCTGAGCTAA ATCAAACACC TGATACGCGT
GATGAGATGG AAGTGATTGT AGTCACTTCC GATTTTCGTG GCACTGAGCT TGAGAAGATG
CCTTCGAGTA TTACCGTTAT CGATCAGCAG CAGATCGAAG ATGAAGGTGC TCAACATTTC
GAAGATATCC TAAACTCCAT CGCAAACTTC AACTGGTCAG GAGGAAGCTC AAGACCAAAA
TACTTCCAAA TACGTGGTGT TGGAGAGCAG GAGGAGTACC AAGGGGCGCC TAACTCCTCA
GTCGGTTATA TTATTGATGA TATTGATATG TCGGGTTTAG GCATGATATC GAGCATGTAC
GACCTGCAGC AAGTAGAGGT GCTTCGTGGG CCGCAAGGGA CACGTTATGG GGCGAATGCA
CTTGCGGGAC TTATCTACCT TAAGAGTAAT GATCCTACTG ATGTGTTTGA GCATGGAGCC
GAAGTCTCTG TAGGCGATGA TGCATTAACG ACATTTAGTG GCTTTAGTTC TGGTCCGTTA
ACAGACTCTG GCAAACTCCT GTATCGAGTG TCACTGCAAC AGCATAAGCA AAACGGTTAT
CAAGATAACC TCTATCTTGG GCGTGATGAT ACCAATGCCC GTGATGAATT TACTGGCCGT
GCAAAATTGC GCTGGTACGC AACTGATGAT TTAGAGATAG ATTTGACCTT GCTGCACGCT
GATTTTGATA ACGGTTATGA TGCTTGGACC TTAGATAATA ATGGTTTCGA TACGTTAACT
GATGCGCCTG GTGTGGACAA ACAGCGAACC TCTGGCAGCT CGCTCAAATT CACTTATACA
GGGGCTGATG CATTTGATTT AGTCTCTTTG ACCTCCTATG CGAGCTCTCA AACTCACCAT
AATTATGACG GTGACTGGGC CAACCCAGAT TATTGGGCTG GCTTAGATTG TGGCGGCGAG
CCTTGTCAGT ATGATTACAC TTGGGATAAG AGAGGAGAGC GTAACACTGT TAGCCAAGAG
TTTAGACTCA GCTCCACAGA AGCCGGGCGT ATTTTTGCTG GGAGCACTGA TTGGTTGCTC
GGCGTTTATG GTATGAATCT CGATGAAAAT AATGAAGTTA CCTCTTTTTA TAACGGCTGG
GCTGACGAGC ATGTTATTTC AGATTTTAAT GCAAGAAACT ATGCAGTTTT TGGTCAAATA
GACTCAGATT TAGGTAATGG CTATTCATTT TCAACAGGAT TGAGAGTCGA AGAGCGAGAG
GCGCAATATG ATGAAGATCG CCTTGTAGAT GGGGAGATGA AAAGCTCAAG CTTTAATCCT
GATGAGACTA TGTGGGGCGG TCATATTGCC TTGAGTAAGA CGCTCAGTAA TACACAGGAG
ACATACATTA GGATTGCTCG TGGCTATAAA GCAGGCGGCT TTAATATGGC TTTGCCTGAG
CAACTAGCGG ATAAAACTGA GTATGACTCT GAGACTCTCT ATAACTATGA AATTGGGTTG
AAATCTATCT GGCTTGATGG TGACATCAAT ACAAATTTCT CCGTTTTCTA TATGGATAGA
CAAGATCAGC AAGTTGCAGC ATCTCAGCAA GCCGTAGAAG ATAGTCAACG TTTTTACCTC
TATACCGAAA ATGCAGGTAG TTCAAGTAAC TATGGTGCTG AACTGGATGG CACTTGGTAT
GCAACAGATA ACTTGAAGTT ATATGCAAGC CTTGGCTGGT TAGAAACCGA ATATGGTGAC
TATTCATATC AGGACAAATA TGGCGGCACG GTTGATTTAA GTGGCCGAGA ACTGGCTCAC
TCACCTAAGT TTACCTATAG CGCTGGGGCG ACGTATCGCA CCGATTCTGG CTGGTTTGCA
AATTTAACCA CGAGCGGTAA GAGTGAGTTT TACTACTCAG ACAGCAATGA GTCTACATCT
GAAGCCTATA CCATCTTCAA TGCTCGTATG GGTTATGAGA CAGAGCTTTG GTCTGCTTAT
CTTTGGGGAC GCAACCTGTT TGATGAGAAA TATGGTACAC GAGGCTTCTA TTTTGGTAAT
GAGCCCGATC AAGATTGGGC TGATAAACAA TATATCCGTT ATGGCGATCC TCGTCAGCTC
GGATTAACCT TTAGTATTAA GTTTATCTAG
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| Protein sequence | MSVSKLSILK KISPVALAVS STLASGYAVA SELNQTPDTR DEMEVIVVTS DFRGTELEKM
PSSITVIDQQ QIEDEGAQHF EDILNSIANF NWSGGSSRPK YFQIRGVGEQ EEYQGAPNSS
VGYIIDDIDM SGLGMISSMY DLQQVEVLRG PQGTRYGANA LAGLIYLKSN DPTDVFEHGA
EVSVGDDALT TFSGFSSGPL TDSGKLLYRV SLQQHKQNGY QDNLYLGRDD TNARDEFTGR
AKLRWYATDD LEIDLTLLHA DFDNGYDAWT LDNNGFDTLT DAPGVDKQRT SGSSLKFTYT
GADAFDLVSL TSYASSQTHH NYDGDWANPD YWAGLDCGGE PCQYDYTWDK RGERNTVSQE
FRLSSTEAGR IFAGSTDWLL GVYGMNLDEN NEVTSFYNGW ADEHVISDFN ARNYAVFGQI
DSDLGNGYSF STGLRVEERE AQYDEDRLVD GEMKSSSFNP DETMWGGHIA LSKTLSNTQE
TYIRIARGYK AGGFNMALPE QLADKTEYDS ETLYNYEIGL KSIWLDGDIN TNFSVFYMDR
QDQQVAASQQ AVEDSQRFYL YTENAGSSSN YGAELDGTWY ATDNLKLYAS LGWLETEYGD
YSYQDKYGGT VDLSGRELAH SPKFTYSAGA TYRTDSGWFA NLTTSGKSEF YYSDSNESTS
EAYTIFNARM GYETELWSAY LWGRNLFDEK YGTRGFYFGN EPDQDWADKQ YIRYGDPRQL
GLTFSIKFI
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