Gene Swoo_0889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0889 
Symbol 
ID6115123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1183953 
End bp1184555 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content45% 
IMG OID641632373 
Productradical SAM domain-containing protein 
Protein accessionYP_001759278 
Protein GI170725252 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACG CAACTCTCAT CTACGATATC CGCAACAGCC GTTACCTTAA TATCACGGGT 
CGTTGCACCC TTCGCTGTCG GTTTTGCCCT AAACATAATG GTAGTAAGCA GGTGCACGAA
TATCAGCTTG CTCTGGATCA TCAGCCAAAG GCTGAAGAGA TCATTAAGCA GCTAGGCAAT
GTGGCGCAAT TTGATGAATA TGTGTTCTGC GGGTATGGTG AGCCGACGCT GAATCTACCG
ACGCTACTTG CCGTAGCTCA AGTCATTAAG CAAAAAGGCG GCAGAGTAAG AGTCAATACC
GATGGTTTAG GGAACCTGGT ACATAGGCGT AATATTTTAC CAGAGTTAGC ACCATGGATA
GACACGCTAT CTATCTCACT GAATGCCGAC ACGGAGCAAG CTTACCAAAC TCATTGCCAA
CCTAAACTTA AAAACAGCTA TCAAGCGGTA AAAGAGTTTA TCTTACTGGC ACCTCACTAT
ATCAATTCTG TTCAAGTATC GGCTATCGAT GGGCTCGAGG GCGTCGATAT CCAAGCCTGT
CAAACATTTG TAGAAAGTTG TGGAGCAAGT TTCAAACATA GAGTACTCGA TATCGTTGGA
TAA
 
Protein sequence
MSNATLIYDI RNSRYLNITG RCTLRCRFCP KHNGSKQVHE YQLALDHQPK AEEIIKQLGN 
VAQFDEYVFC GYGEPTLNLP TLLAVAQVIK QKGGRVRVNT DGLGNLVHRR NILPELAPWI
DTLSISLNAD TEQAYQTHCQ PKLKNSYQAV KEFILLAPHY INSVQVSAID GLEGVDIQAC
QTFVESCGAS FKHRVLDIVG