Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0757 |
Symbol | |
ID | 6114991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 1029242 |
End bp | 1029874 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 641632242 |
Product | LuxR family transcriptional regulator |
Protein accession | YP_001759147 |
Protein GI | 170725121 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTTGATG GCGAAATTTT TACTCCAAAA CTCACAGAAA ACAACTTACT TTTATTGAAA AGTACGGCAG GTTTTTTAAA CCTAAAAGTA AATCAAAGTA AGAATCTTGT GAACGCATGG AGTAATTGCC AAGAGAAGCA AAAAATCTTA TTGCACTTTA TGAGCTCTGT TTCTAATGAT ATTCAAAATA TTGAAAAGAG CCTGCTTTCC GATGGTTTTC ATATTGCCAT CTGTAACAAG CTATCAATTG ATGATGAAGT TTCCCTTATA AAACTTGGCT TTAGAGCATC TGTCTCATCT GATGCTCCAG CTCACCTTTT ATTGGAAACA ATATCTAAGA TCCTTAAAGG TAACCTTTAC TTTAGCAATG AAGCTCTCTC TAAATTCATT TTAAACTATC AAAAACAAAC TCTGTCAGAA GGACAGGTCT TATTAATCAC CTCAACAACT AAAAAAGAGA AAGAGGTATT ATCCCTAGTT TGCAATGGTT TTAGTAATGA GCAGGTCGCC CATCAATTAA ATGTTTCGAT TAACACAATA AAAATGCATA TGCAAAATAT TTACAAAAAG ACCAACATAA GAAACCGTAG TCATTTATTA CTAGCCTATA ACCAAGGAAT GGAGATTAAT TAA
|
Protein sequence | MFDGEIFTPK LTENNLLLLK STAGFLNLKV NQSKNLVNAW SNCQEKQKIL LHFMSSVSND IQNIEKSLLS DGFHIAICNK LSIDDEVSLI KLGFRASVSS DAPAHLLLET ISKILKGNLY FSNEALSKFI LNYQKQTLSE GQVLLITSTT KKEKEVLSLV CNGFSNEQVA HQLNVSINTI KMHMQNIYKK TNIRNRSHLL LAYNQGMEIN
|
| |